RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 DIAPH2O60879 1101 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 SLC25A14O95258 325 aaPredicted RBP9.87□□□□□ -0.83
CBX5-202ENST00000439541 IGLV3-19P01714 112 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 ZNF7P17097 686 aaPredicted RBP9.87□□□□□ -0.83
CBX5-202ENST00000439541 PTPN4P29074 926 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 CTSCP53634 463 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 SLC12A2P55011 1212 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 CLDN2P57739 230 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 POU4F1Q01851 419 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 SLC18A2Q05940 514 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 DPTQ07507 201 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 INPP5AQ14642 412 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 NAA25Q14CX7 972 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 PTRHD1Q6GMV3 140 aaKnown RBP9.87□□□□□ -0.83
CBX5-202ENST00000439541 C16orf46Q6P387 395 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 CENPLQ8N0S6 344 aaPredicted RBP9.87□□□□□ -0.83
CBX5-202ENST00000439541 DEFB119Q8N690 84 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 KCTD4Q8WVF5 259 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 ANKRD49Q8WVL7 239 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 SGF29Q96ES7 293 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 VPS35Q96QK1 796 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 LGR4Q9BXB1 951 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 GPR174Q9BXC1 333 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 TRIM55Q9BYV6 548 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 CDH19Q9H159 772 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 CCDC68Q9H2F9 335 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 FAM8A1Q9UBU6 413 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 ZFP69BQ9UJL9 534 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 VPS9D1Q9Y2B5 631 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 VWA7Q9Y334 891 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 BDP1A6H8Y1 2624 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 TRPM6Q9BX84 2022 aa9.87□□□□□ -0.83
CBX5-202ENST00000439541 COPEO14579 308 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 SGTAO43765 313 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 TRIM16O95361 564 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 WISP3O95389 354 aaPredicted RBP9.86□□□□□ -0.83
CBX5-202ENST00000439541 TGDSO95455 350 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 ESR1P03372 595 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 IGHV4-34P06331 123 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 CALB2P22676 271 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 CD6P30203 668 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 NSG1P42857 185 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 GLRBP48167 497 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 IRX4P78413 519 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 CDK3Q00526 305 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 SGCGQ13326 291 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 TAF1BQ53T94 588 aaPredicted RBP9.86□□□□□ -0.83
CBX5-202ENST00000439541 PNCKQ6P2M8 343 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 OTOAQ7RTW8 1153 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 CLEC14AQ86T13 490 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 TEX9Q8N6V9 391 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 RASGEF1AQ8N9B8 481 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 CD200R1Q8TD46 325 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 TCP10LQ8TDR4 215 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 SCG3Q8WXD2 468 aaKnown RBP9.86□□□□□ -0.83
CBX5-202ENST00000439541 THOC1Q96FV9 657 aaKnown RBP9.86□□□□□ -0.83
CBX5-202ENST00000439541 FAM111AQ96PZ2 611 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 OR2AG1Q9H205 316 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 RNPEPL1Q9HAU8 725 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 SGK2Q9HBY8 427 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 GPAMQ9HCL2 828 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 SLCO1B3Q9NPD5 702 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 SPATA6Q9NWH7 488 aaPredicted RBP9.86□□□□□ -0.83
CBX5-202ENST00000439541 GNPTGQ9UJJ9 305 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 EMCNQ9ULC0 261 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 CORO1CQ9ULV4 474 aaPredicted RBP9.86□□□□□ -0.83
CBX5-202ENST00000439541 TMEM98Q9Y2Y6 226 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 SLCO1B1Q9Y6L6 691 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 TMEM221A6NGB7 291 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 LRRC72A6NJI9 287 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 E5RI56 91 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 M0R296 226 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 PFDN6O15212 129 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 CCDC22O60826 627 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 ATP1B2P14415 290 aaPredicted RBP9.86□□□□□ -0.83
CBX5-202ENST00000439541 ZNF37AP17032 561 aaPredicted RBP9.86□□□□□ -0.83
CBX5-202ENST00000439541 AOC1P19801 751 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 CHRM3P20309 590 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 MSH3P20585 1137 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 RPS3P23396 243 aaKnown RBP eCLIP9.86□□□□□ -0.834e-6■□□□□ 10.5
CBX5-202ENST00000439541 PBLDP30039 288 aaPredicted RBP9.86□□□□□ -0.83
CBX5-202ENST00000439541 CXCL12P48061 93 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 POLD2P49005 469 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 CLCN7P51798 805 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 ADARP55265 1226 aaKnown RBP9.86□□□□□ -0.83
CBX5-202ENST00000439541 PDAP1Q13442 181 aaKnown RBP9.86□□□□□ -0.83
CBX5-202ENST00000439541 CSHL1Q14406 222 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 AGERQ15109 404 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 MAP7D1Q3KQU3 841 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 PLA2G4EQ3MJ16 856 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 CMPK2Q5EBM0 449 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 N4BP2L1Q5TBK1 243 aaPredicted RBP9.86□□□□□ -0.83
CBX5-202ENST00000439541 LYPLAL1Q5VWZ2 237 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 PAQR3Q6TCH7 311 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 CRTC3Q6UUV7 619 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 ADAMTSL4Q6UY14 1074 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 ADGRG6Q86SQ4 1221 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 TRIM69Q86WT6 500 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 TRIM42Q8IWZ5 723 aa9.86□□□□□ -0.83
CBX5-202ENST00000439541 RAVER1Q8IY67 606 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms