RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 GAD1Q99259 594 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 NPY6RQ99463 290 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 VAT1Q99536 393 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 DSEQ9UL01 958 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 SNX5Q9Y5X3 404 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 MTCH2Q9Y6C9 303 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 PSMD11O00231 422 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 MATN4O95460 622 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 NADKO95544 446 aaPredicted RBP8.47□□□□□ -1.05
HPS4-206ENST00000439453 TCF3P15923 654 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 SERPINB1P30740 379 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 GP2P55259 537 aaKnown RBP8.47□□□□□ -1.05
HPS4-206ENST00000439453 CLCQ05315 142 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 MAPK11Q15759 364 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 MEP1AQ16819 746 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 DCAF4L1Q3SXM0 396 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 UNC50Q53HI1 259 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 COQ5Q5HYK3 327 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 ZNF678Q5SXM1 525 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 BLOC1S3Q6QNY0 202 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 STK32CQ86UX6 486 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 UNC93AQ86WB7 457 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 CHDHQ8NE62 594 aaPredicted RBP8.47□□□□□ -1.05
HPS4-206ENST00000439453 PPHLN1Q8NEY8 458 aaKnown RBP8.47□□□□□ -1.05
HPS4-206ENST00000439453 HSFY1Q96LI6 401 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 TBL1YQ9BQ87 522 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 PAAF1Q9BRP4 392 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 SLC52A3Q9NQ40 469 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 FBXO8Q9NRD0 319 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 PIGVQ9NUD9 493 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 THG1LQ9NWX6 298 aaKnown RBP8.47□□□□□ -1.05
HPS4-206ENST00000439453 ZNF229Q9UJW7 825 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 LRFN2Q9ULH4 789 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 PCDHGA8Q9Y5G5 932 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 DNAJC15Q9Y5T4 150 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 MAGED1Q9Y5V3 778 aaPredicted RBP8.47□□□□□ -1.05
HPS4-206ENST00000439453 OAS3Q9Y6K5 1087 aaKnown RBP8.47□□□□□ -1.05
HPS4-206ENST00000439453 ANKRD12Q6UB98 2062 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 M0R3G1 203 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 UBXN8O00124 270 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 UPK1AO00322 258 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 PIP5K1BO14986 540 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 GRM6O15303 877 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 NDUFS2O75306 463 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 ITIH1P19827 911 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 HRH2P25021 359 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 SCNN1GP51170 649 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 CDH13P55290 713 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 IFITM2Q01629 132 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 ADIGQ0VDE8 80 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 NOMO2Q5JPE7 1267 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 ATAD3BQ5T9A4 648 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 ARMCX6Q7L4S7 300 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 BNIPLQ7Z465 357 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 RIMKLAQ8IXN7 391 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 ATP6V0D2Q8N8Y2 350 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 OR7A2PQ8NGA2 310 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 SPATA22Q8NHS9 363 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 NT5C3BQ969T7 300 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 TMBIM1Q969X1 311 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 IL12RB2Q99665 862 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 TOR3AQ9H497 397 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 SDR39U1Q9NRG7 319 aaPredicted RBP8.47□□□□□ -1.05
HPS4-206ENST00000439453 GDAP2Q9NXN4 497 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 KLK14Q9P0G3 267 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 USP22Q9UPT9 525 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 MYO7AQ13402 2215 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 ADRA1BP35368 520 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 NEK2P51955 445 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 EEFSECP57772 596 aaKnown RBP8.47□□□□□ -1.05
HPS4-206ENST00000439453 SOX4Q06945 474 aaPredicted RBP8.47□□□□□ -1.05
HPS4-206ENST00000439453 ILF2Q12905 390 aaKnown RBP8.47□□□□□ -1.05
HPS4-206ENST00000439453 ACAP2Q15057 778 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 CRY1Q16526 586 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 KYAT1Q16773 422 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 DGUOKQ16854 277 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 GEN1Q17RS7 908 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 SYPL2Q5VXT5 272 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 TTC23Q5W5X9 447 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 UGT3A1Q6NUS8 523 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 ARMC8Q8IUR7 673 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 PHYKPLQ8IUZ5 450 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 SLC39A11Q8N1S5 342 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 OR6Q1Q8NGQ2 317 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 L3HYPDHQ96EM0 354 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 AURKBQ96GD4 344 aaPredicted RBP8.47□□□□□ -1.05
HPS4-206ENST00000439453 TMEM74Q96NL1 305 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 PCDHB3Q9Y5E6 796 aa8.47□□□□□ -1.05
HPS4-206ENST00000439453 ZNF99A8MXY4 864 aaPredicted RBP8.46□□□□□ -1.05
HPS4-206ENST00000439453 H3BMM5 538 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 DNAJB5O75953 348 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 SLC34A2O95436 690 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 LBPP18428 481 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 SERPINB10P48595 397 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 SLC11A1P49279 550 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 SH3BP2P78314 561 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 DMPKQ09013 629 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 ZNF789Q5FWF6 425 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 IL31Q6EBC2 164 aa8.46□□□□□ -1.05
HPS4-206ENST00000439453 AKAP14Q86UN6 197 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms