RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 MLLT6P55198 1093 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 NAB1Q13506 487 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 SQLEQ14534 574 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 PAGE3Q5JUK9 113 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 SIRPB2Q5JXA9 342 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 ANGPTL8Q6UXH0 198 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 GCNT7Q6ZNI0 430 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 ITFG1Q8TB96 612 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 PNPT1Q8TCS8 783 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 NT5C3BQ969T7 300 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 FAM162AQ96A26 154 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 C14orf119Q9NWQ9 140 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 GPSM3Q9Y4H4 160 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZFC3H1O60293 1989 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 CLDN25C9JDP6 229 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 HHLA1C9JL84 531 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 F5H5T6 163 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 H0Y626 953 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 UBFD1O14562 309 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 SNPHO15079 494 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 AP1G1O43747 822 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 TBC1D4O60343 1298 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 TRIM16O95361 564 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 IL1BP01584 269 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 AQP1P29972 269 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 RPL9P32969 192 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 FAM189BP81408 668 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 TXNL4AP83876 142 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 TRIM60Q495X7 471 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 ATP6AP1LQ52LC2 224 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 BROXQ5VW32 411 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 THOC7Q6I9Y2 204 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 GLYATQ6IB77 296 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 CCDC80Q76M96 950 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 TMCO2Q7Z6W1 182 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 LSRQ86X29 649 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 TICAM1Q8IUC6 712 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 PHACTR4Q8IZ21 702 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 CARNMT1Q8N4J0 409 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 ATP6V0D2Q8N8Y2 350 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 CALML6Q8TD86 181 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 STYXQ8WUJ0 223 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 TWIST2Q8WVJ9 160 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 FCRL5Q96RD9 977 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 CSF3RQ99062 836 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 KIFC1Q9BW19 673 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 CINPQ9BW66 212 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 ANKRD60Q9BZ19 345 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 TNKS2Q9H2K2 1166 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 TPK1Q9H3S4 243 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 ATP13A1Q9HD20 1204 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 NSMCE4AQ9NXX6 385 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZNF451Q9Y4E5 1061 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 ANGPTL3Q9Y5C1 460 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 A0A0U1RQF3 1178 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 M0R129 80 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 CD3EAPO15446 510 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 BCAS1O75363 584 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 PGLSO95336 258 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 SERPINF2P08697 491 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 SCNN1AP37088 669 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 AQP6Q13520 282 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 LRP8Q14114 963 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 TSNQ15631 228 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 AP5B1Q2VPB7 878 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 TXNDC11Q6PKC3 985 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 PRR23CQ6ZRP0 262 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 FRA10AC1Q70Z53 315 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 FUNDC1Q8IVP5 155 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 OR8H2Q8N162 312 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 CENPNQ96H22 339 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 SLC2A11Q9BYW1 496 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 GPR62Q9BZJ7 368 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 TRIM15Q9C019 465 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 VTI1BQ9UEU0 232 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 SLC30A1Q9Y6M5 507 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 MGAMO43451 1857 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 CCDC154A6NI56 674 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 TBKBP1A7MCY6 615 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 CCRL2O00421 344 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 AQP9O43315 295 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 LRATO95237 230 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 CHEK2O96017 543 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 CST1P01037 141 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 ARNTP27540 789 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 NUDT6P53370 316 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 SH3BP2P78314 561 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 CHRNB3Q05901 458 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 CDK18Q07002 472 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 INAVAQ3KP66 663 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 MS4A13Q5J8X5 152 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 LRRC73Q5JTD7 316 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 KCTD11Q693B1 232 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 MRNIPQ6NTE8 343 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 PAQR3Q6TCH7 311 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 PIWIL4Q7Z3Z4 852 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 GLT6D1Q7Z4J2 308 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 MON1AQ86VX9 555 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 FAM126BQ8IXS8 530 aa9.82□□□□□ -0.84
CDC42SE1-202ENST00000439374 C8orf59Q8N0T1 100 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms