RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 OR8K5Q8NH50 307 aa10.94□□□□□ -0.66
CSTF3-203ENST00000438862 COG1Q8WTW3 980 aa10.94□□□□□ -0.66
CSTF3-203ENST00000438862 FAM172AQ8WUF8 416 aa10.94□□□□□ -0.66
CSTF3-203ENST00000438862 FAR1Q8WVX9 515 aa10.94□□□□□ -0.66
CSTF3-203ENST00000438862 ZNF514Q96K75 400 aaPredicted RBP10.94□□□□□ -0.66
CSTF3-203ENST00000438862 FER1L6-AS2Q96M78 137 aa10.94□□□□□ -0.66
CSTF3-203ENST00000438862 PSKH2Q96QS6 385 aa10.94□□□□□ -0.66
CSTF3-203ENST00000438862 PANX2Q96RD6 677 aa10.94□□□□□ -0.66
CSTF3-203ENST00000438862 MCCC1Q96RQ3 725 aaPredicted RBP10.94□□□□□ -0.66
CSTF3-203ENST00000438862 DNAJC7Q99615 494 aa10.94□□□□□ -0.66
CSTF3-203ENST00000438862 CHST8Q9H2A9 424 aa10.94□□□□□ -0.66
CSTF3-203ENST00000438862 FGF21Q9NSA1 209 aa10.94□□□□□ -0.66
CSTF3-203ENST00000438862 CD84Q9UIB8 345 aa10.94□□□□□ -0.66
CSTF3-203ENST00000438862 PCDHGC4Q9Y5F7 938 aa10.94□□□□□ -0.66
CSTF3-203ENST00000438862 ANKHD1Q8IWZ3 2542 aaKnown RBP10.94□□□□□ -0.66
CSTF3-203ENST00000438862 MYO7BQ6PIF6 2116 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 NPIPB15A6NHN6 443 aaPredicted RBP10.93□□□□□ -0.66
CSTF3-203ENST00000438862 C2CD4BA6NLJ0 364 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 MEN1O00255 615 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 E2F3O00716 465 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 PRICKLE3O43900 615 aaPredicted RBP10.93□□□□□ -0.66
CSTF3-203ENST00000438862 MFAP3LO75121 409 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 SNRPB2P08579 225 aaKnown RBP10.93□□□□□ -0.66
CSTF3-203ENST00000438862 HTR7P34969 479 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 PRKCIP41743 596 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 ARL4DP49703 201 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 AIF1P55008 147 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 GPS2Q13227 327 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 ATP1A4Q13733 1029 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 FCRL6Q6DN72 434 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 USP45Q70EL2 814 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 ZNF677Q86XU0 584 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 TMEM126BQ8IUX1 230 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 RAVER1Q8IY67 606 aaKnown RBP10.93□□□□□ -0.66
CSTF3-203ENST00000438862 ZNF295-AS1Q8N0V1 137 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 NDUFAF2Q8N183 169 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 GALNT16Q8N428 558 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 CLEC1AQ8NC01 280 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 ITLN2Q8WWU7 325 aaPredicted RBP10.93□□□□□ -0.66
CSTF3-203ENST00000438862 SCAMP4Q969E2 229 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 NSMCE3Q96MG7 304 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 SLC39A8Q9C0K1 460 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 ZNF552Q9H707 407 aaPredicted RBP10.93□□□□□ -0.66
CSTF3-203ENST00000438862 NLRC4Q9NPP4 1024 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 KCND1Q9NSA2 647 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 ZNHIT6Q9NWK9 470 aaKnown RBP10.93□□□□□ -0.66
CSTF3-203ENST00000438862 SUCOQ9UBS9 1254 aaKnown RBP10.93□□□□□ -0.66
CSTF3-203ENST00000438862 PPIL1Q9Y3C6 166 aa10.93□□□□□ -0.66
CSTF3-203ENST00000438862 PCYT1BQ9Y5K3 369 aaPredicted RBP10.93□□□□□ -0.66
CSTF3-203ENST00000438862 IGHV5-51A0A0C4DH38 117 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 GRID2O43424 1007 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 GFPT2O94808 682 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 ATP1A1P05023 1023 aaKnown RBP10.92□□□□□ -0.66
CSTF3-203ENST00000438862 ZNF30P17039 623 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 GSK3AP49840 483 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 SOX8P57073 446 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 TUBB4BP68371 445 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 APBA1Q02410 837 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 PTSQ03393 145 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 IL10RBQ08334 325 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 TUBB2AQ13885 445 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 MTFR2Q6P444 385 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 IRF2BP2Q7Z5L9 587 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 MRGPRGQ86SM5 289 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 TSPAN33Q86UF1 283 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 DSELQ8IZU8 1212 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 ZNF808Q8N4W9 903 aaPredicted RBP10.92□□□□□ -0.66
CSTF3-203ENST00000438862 TC2NQ8N9U0 490 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 GRHL3Q8TE85 626 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 CPA5Q8WXQ8 436 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 CPT1BQ92523 772 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 RSC1A1Q92681 617 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 AGAP2Q99490 1192 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 MLPHQ9BV36 600 aaPredicted RBP10.92□□□□□ -0.66
CSTF3-203ENST00000438862 TUBB2BQ9BVA1 445 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 SP110Q9HB58 689 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 SLC40A1Q9NP59 571 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 ABHD10Q9NUJ1 306 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 POT1Q9NUX5 634 aa10.92□□□□□ -0.66
CSTF3-203ENST00000438862 ZNF624Q9P2J8 865 aaPredicted RBP10.92□□□□□ -0.66
CSTF3-203ENST00000438862 LRRC53A6NM62 1247 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 NUAK1O60285 661 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 NADKO95544 446 aaPredicted RBP10.91□□□□□ -0.66
CSTF3-203ENST00000438862 SERPING1P05155 500 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 EBLN1P0CF75 366 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 CA5AP35218 305 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 RFC1P35251 1148 aaPredicted RBP10.91□□□□□ -0.66
CSTF3-203ENST00000438862 HSPA9P38646 679 aaKnown RBP10.91□□□□□ -0.66
CSTF3-203ENST00000438862 HADHAP40939 763 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 TSFMP43897 325 aaKnown RBP10.91□□□□□ -0.66
CSTF3-203ENST00000438862 HSD11B2P80365 405 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 KCNAB1Q14722 419 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 LBRQ14739 615 aaKnown RBP10.91□□□□□ -0.66
CSTF3-203ENST00000438862 SMTNL2Q2TAL5 461 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 RALGPS1Q5JS13 557 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 PLEKHS1Q5SXH7 462 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 LRRC66Q68CR7 880 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 KLHL35Q6PF15 583 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 RFLNAQ6ZTI6 216 aa10.91□□□□□ -0.66
CSTF3-203ENST00000438862 D2HGDHQ8N465 521 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms