RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ESAMQ96AP7 390 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 ZSWIM3Q96MP5 696 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 TFB2MQ9H5Q4 396 aaKnown RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 ZNF696Q9H7X3 374 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 SARS2Q9NP81 518 aaKnown RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 UTP6Q9NYH9 597 aaKnown RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 KIAA1522Q9P206 1035 aaPredicted RBP13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 RNF11Q9Y3C5 154 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 ATG2AQ2TAZ0 1938 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 CROCCQ5TZA2 2017 aa13.73□□□□□ -0.21
PTCHD3-201ENST00000438700 PRORSD1PA6NEY8 169 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 ANKRD66B4E2M5 251 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 AZIN1O14977 448 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 KERAO60938 352 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 ECI2O75521 394 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 IMPDH2P12268 514 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 LPOP22079 712 aaPredicted RBP13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 TPP2P29144 1249 aaPredicted RBP13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 AGTR2P50052 363 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 RAD51Q06609 339 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 PLEKHG6Q3KR16 790 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 KLHL35Q6PF15 583 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 TMEM25Q86YD3 366 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 FUNDC1Q8IVP5 155 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 LEMD2Q8NC56 503 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 OR6K2Q8NGY2 324 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 STAG3L4Q8TBR4 150 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 ATP6V1E2Q96A05 226 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 KIAA1191Q96A73 305 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 ZNF707Q96C28 371 aaPredicted RBP13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 BIRC8Q96P09 236 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 SLC25A23Q9BV35 468 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 TUBB1Q9H4B7 451 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 IL1RL2Q9HB29 575 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 POPDC3Q9HBV1 291 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 SYTL2Q9HCH5 934 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 SPAG4Q9NPE6 437 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 INTS6Q9UL03 887 aaKnown RBP13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 YBX2Q9Y2T7 364 aaKnown RBP13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 NR5A2O00482 541 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 NRP2O60462 931 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 BMP1P13497 986 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 CEBPBP17676 345 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 MAGEA10P43363 369 aaPredicted RBP13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 CLCQ05315 142 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 ZFP1Q6P2D0 407 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 CYP2R1Q6VVX0 501 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 CPNE9Q8IYJ1 553 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 DCBLD1Q8N8Z6 715 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 ACDQ96AP0 544 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 TUBGCP3Q96CW5 907 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 ASB9Q96DX5 294 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 LRCH3Q96II8 777 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 DERL2Q9GZP9 239 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 ABCB8Q9NUT2 735 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 GMPR2Q9P2T1 348 aaKnown RBP13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 BCAP29Q9UHQ4 241 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 RIMKLBQ9ULI2 386 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 TIMM22Q9Y584 194 aa13.72□□□□□ -0.21
PTCHD3-201ENST00000438700 IQCF5A8MTL0 148 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 NEDD8-MDP1E9PL57 170 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 HNRNPCP07910 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 PRDX3P30048 256 aaKnown RBP13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 PBX2P40425 430 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 CDH15P55291 814 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 SH3BGRP55822 239 aaPredicted RBP13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 RPL26P61254 145 aaKnown RBP13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 ERVK-21P61565 698 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 TRIM25Q14258 630 aaKnown RBP13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 CBX2Q14781 532 aaPredicted RBP13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 IL23RQ5VWK5 629 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 FUBP1Q96AE4 644 aaKnown RBP13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 ADGRE3Q9BY15 652 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 Q9H521 79 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 EPS15L1Q9UBC2 864 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 TRANK1O15050 2925 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 A0A0J9YYE9 177 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 TMX2-CTNND1H3BSU7 103 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 PLOD2O00469 737 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 STX7O15400 261 aaKnown RBP13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 CRCPO75575 148 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 HLA-FP30511 346 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 ZNF77Q15935 545 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 VPS26BQ4G0F5 336 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 KANK2Q63ZY3 851 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 PDE12Q6L8Q7 609 aaKnown RBP13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 TAS2R42Q7RTR8 314 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 RETREG3Q86VR2 466 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 C12orf76Q8N812 135 aaPredicted RBP13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 TMEM102Q8N9M5 508 aaPredicted RBP13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 LINC00597Q9H2U6 94 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 POLG2Q9UHN1 485 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 PCDHB9Q9Y5E1 797 aa13.71□□□□□ -0.21
PTCHD3-201ENST00000438700 HGFP14210 728 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 ZNF26P17031 533 aaPredicted RBP13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 CHRM3P20309 590 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 GPX3P22352 226 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 CTSOP43234 321 aaPredicted RBP13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 SLC7A2P52569 658 aa13.7□□□□□ -0.22
PTCHD3-201ENST00000438700 LCP2Q13094 533 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms