RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 NUSAP1Q9BXS6 441 aaKnown RBP16.53■□□□□ 0.24
TTC3-209ENST00000438055 RPF2Q9H7B2 306 aaKnown RBP16.53■□□□□ 0.24
TTC3-209ENST00000438055 EBF1Q9UH73 591 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 EVLQ9UI08 416 aaPredicted RBP16.53■□□□□ 0.24
TTC3-209ENST00000438055 CDC14AQ9UNH5 594 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 SQORQ9Y6N5 450 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 ADAM12O43184 909 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 TBL1XO60907 577 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 RGS4P49798 205 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 HK3P52790 923 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 HMGCS1Q01581 520 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 RCAN2Q14206 197 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 LYSMD3Q7Z3D4 306 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 TMEM173Q86WV6 379 aaPredicted RBP16.53■□□□□ 0.24
TTC3-209ENST00000438055 OR4F6Q8NGB9 312 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 CDC26Q8NHZ8 85 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 ARIH1Q9Y4X5 557 aaPredicted RBP16.53■□□□□ 0.24
TTC3-209ENST00000438055 MIA3Q5JRA6 1907 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 H7C4K7 107 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 WISP3O95389 354 aaPredicted RBP16.53■□□□□ 0.24
TTC3-209ENST00000438055 TNK2Q07912 1038 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 AAK1Q2M2I8 961 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 HM13Q8TCT9 377 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 CD200R1Q8TD46 325 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 FAM162AQ96A26 154 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 CCDC138Q96M89 665 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 BIRC8Q96P09 236 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 RBM38Q9H0Z9 239 aaKnown RBP16.53■□□□□ 0.24
TTC3-209ENST00000438055 CXorf21Q9HAI6 301 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 ABCD2Q9UBJ2 740 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 PADI4Q9UM07 663 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 MED16Q9Y2X0 877 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 RAD51BO15315 384 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 KDELR3O43731 214 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 DEAF1O75398 565 aaPredicted RBP16.52■□□□□ 0.24
TTC3-209ENST00000438055 UGT1A1P22309 533 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 UGT1A4P22310 534 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 UGT1A3P35503 534 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 UGT1A5P35504 534 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 SUOXP51687 545 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 SREBF2Q12772 1141 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 PABPC1LQ4VXU2 614 aaKnown RBP16.52■□□□□ 0.24
TTC3-209ENST00000438055 CYP20A1Q6UW02 462 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 FBXO22Q8NEZ5 403 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 NSMCE3Q96MG7 304 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 IRAK4Q9NWZ3 460 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 TMEM161AQ9NX61 479 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 ZNF225Q9UK10 706 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 PCDHA9Q9Y5H5 950 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 NYNRINQ9P2P1 1898 aaKnown RBP16.52■□□□□ 0.24
TTC3-209ENST00000438055 C1orf232A0A0U1RR37 186 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 A0A1B0GVM2 712 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 FAM234BA2RU67 622 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 COCHO43405 550 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 SEC22BO75396 215 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 CDK4P11802 303 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 CDK9P50750 372 aaKnown RBP16.52■□□□□ 0.24
TTC3-209ENST00000438055 GTF2H2Q13888 395 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 PTGR1Q14914 329 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 FAM98BQ52LJ0 330 aaKnown RBP16.52■□□□□ 0.24
TTC3-209ENST00000438055 GTF2H2CQ6P1K8 395 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 FAM117BQ6P1L5 589 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 ANKS3Q6ZW76 656 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 LRRC3Q9BY71 257 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 DPY30Q9C005 99 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 CCDC90BQ9GZT6 254 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 TMCO1Q9UM00 188 aa16.52■□□□□ 0.24
TTC3-209ENST00000438055 MAGED1Q9Y5V3 778 aaPredicted RBP16.52■□□□□ 0.24
TTC3-209ENST00000438055 STX16O14662 325 aa16.52■□□□□ 0.23
TTC3-209ENST00000438055 PRAMEF1O95521 474 aa16.52■□□□□ 0.23
TTC3-209ENST00000438055 PRLP01236 227 aa16.52■□□□□ 0.23
TTC3-209ENST00000438055 ATF6P18850 670 aa16.52■□□□□ 0.23
TTC3-209ENST00000438055 MZF1P28698 734 aaPredicted RBP16.52■□□□□ 0.23
TTC3-209ENST00000438055 GKP32189 559 aa16.52■□□□□ 0.23
TTC3-209ENST00000438055 RFC2P35250 354 aa16.52■□□□□ 0.23
TTC3-209ENST00000438055 STT3AP46977 705 aa16.52■□□□□ 0.23
TTC3-209ENST00000438055 ALDH7A1P49419 539 aaKnown RBP16.52■□□□□ 0.23
TTC3-209ENST00000438055 HPCAP84074 193 aa16.52■□□□□ 0.23
TTC3-209ENST00000438055 CTSL3PQ5NE16 218 aa16.52■□□□□ 0.23
TTC3-209ENST00000438055 PLEKHG4BQ96PX9 1271 aa16.52■□□□□ 0.23
TTC3-209ENST00000438055 TRIB3Q96RU7 358 aa16.52■□□□□ 0.23
TTC3-209ENST00000438055 PDFQ9HBH1 243 aa16.52■□□□□ 0.23
TTC3-209ENST00000438055 ZNF7P17097 686 aaPredicted RBP16.51■□□□□ 0.23
TTC3-209ENST00000438055 IL12AP29459 219 aa16.51■□□□□ 0.23
TTC3-209ENST00000438055 CAPGP40121 348 aa16.51■□□□□ 0.23
TTC3-209ENST00000438055 CCT8P50990 548 aa16.51■□□□□ 0.23
TTC3-209ENST00000438055 ILF2Q12905 390 aaKnown RBP16.51■□□□□ 0.23
TTC3-209ENST00000438055 ARMC12Q5T9G4 340 aa16.51■□□□□ 0.23
TTC3-209ENST00000438055 ADAMTSL2Q86TH1 951 aa16.51■□□□□ 0.23
TTC3-209ENST00000438055 HID1Q8IV36 788 aa16.51■□□□□ 0.23
TTC3-209ENST00000438055 SFRP1Q8N474 314 aa16.51■□□□□ 0.23
TTC3-209ENST00000438055 OR10A6Q8NH74 314 aa16.51■□□□□ 0.23
TTC3-209ENST00000438055 FATE1Q969F0 183 aa16.51■□□□□ 0.23
TTC3-209ENST00000438055 EIF3LQ9Y262 564 aaKnown RBP16.51■□□□□ 0.23
TTC3-209ENST00000438055 ZNF236Q9UL36 1845 aa16.51■□□□□ 0.23
TTC3-209ENST00000438055 SLC25A14O95258 325 aaPredicted RBP16.51■□□□□ 0.23
TTC3-209ENST00000438055 KLKB1P03952 638 aa16.51■□□□□ 0.23
TTC3-209ENST00000438055 MAP4P27816 1152 aaKnown RBP16.51■□□□□ 0.23
TTC3-209ENST00000438055 AKT1P31749 480 aa16.51■□□□□ 0.23
TTC3-209ENST00000438055 SMAD3P84022 425 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms