RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 TCHHL1Q5QJ38 904 aaPredicted RBP15.45■□□□□ 0.06
NEDD4-202ENST00000435532 CAMK1DQ8IU85 385 aa15.45■□□□□ 0.06
NEDD4-202ENST00000435532 MREGQ8N565 214 aa15.45■□□□□ 0.06
NEDD4-202ENST00000435532 POU5F2Q8N7G0 328 aa15.45■□□□□ 0.06
NEDD4-202ENST00000435532 MAPK15Q8TD08 544 aa15.45■□□□□ 0.06
NEDD4-202ENST00000435532 SLC35F5Q8WV83 523 aa15.45■□□□□ 0.06
NEDD4-202ENST00000435532 LRIG1Q96JA1 1093 aa15.45■□□□□ 0.06
NEDD4-202ENST00000435532 SMOQ99835 787 aa15.45■□□□□ 0.06
NEDD4-202ENST00000435532 BCAS3Q9H6U6 928 aa15.45■□□□□ 0.06
NEDD4-202ENST00000435532 SEMA5AQ13591 1074 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 CMC1Q7Z7K0 106 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 TEX47Q8TBZ9 253 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 DNASE1L2Q92874 299 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 EQTNQ9NQ60 294 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 C19orf25Q9UFG5 118 aaPredicted RBP15.44■□□□□ 0.06
NEDD4-202ENST00000435532 CYP8B1Q9UNU6 501 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 TGDSO95455 350 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 SCTRP47872 440 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 ZNF784Q8NCA9 323 aaPredicted RBP15.44■□□□□ 0.06
NEDD4-202ENST00000435532 OR6Y1Q8NGX8 325 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 CPT1BQ92523 772 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 ZNF354BQ96LW1 612 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 NOL11Q9H8H0 719 aaKnown RBP15.44■□□□□ 0.06
NEDD4-202ENST00000435532 RGS5O15539 181 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 SUV39H1O43463 412 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 STX11O75558 287 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 HSPA7P48741 367 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 HNMTP50135 292 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 RPS21P63220 83 aaKnown RBP15.44■□□□□ 0.06
NEDD4-202ENST00000435532 MPP1Q00013 466 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 NFATC2Q13469 925 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 CYP2R1Q6VVX0 501 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 EXOSC8Q96B26 276 aaKnown RBP15.44■□□□□ 0.06
NEDD4-202ENST00000435532 PTCD3Q96EY7 689 aaKnown RBP15.44■□□□□ 0.06
NEDD4-202ENST00000435532 ART5Q96L15 291 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 NELL2Q99435 816 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 MMP20O60882 483 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 UBOX5O94941 541 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 TOP3BO95985 862 aaKnown RBP15.44■□□□□ 0.06
NEDD4-202ENST00000435532 UROSP10746 265 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 COX4I1P13073 169 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 NMBRP28336 390 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 DRICH1Q6PGQ1 229 aaPredicted RBP15.44■□□□□ 0.06
NEDD4-202ENST00000435532 TPRG1Q6ZUI0 275 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 BEND5Q7L4P6 421 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 SMG8Q8ND04 991 aaKnown RBP15.44■□□□□ 0.06
NEDD4-202ENST00000435532 DNAAF2Q9NVR5 837 aaKnown RBP15.44■□□□□ 0.06
NEDD4-202ENST00000435532 ZNF180Q9UJW8 692 aa15.44■□□□□ 0.06
NEDD4-202ENST00000435532 CBSLP0DN79 551 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 CBSP35520 551 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 KIR3DL1P43629 444 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 TRIM71Q2Q1W2 868 aaKnown RBP15.43■□□□□ 0.06
NEDD4-202ENST00000435532 SLC30A9Q6PML9 568 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.43■□□□□ 0.06
NEDD4-202ENST00000435532 SLC9A6Q92581 669 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 MARK4Q96L34 752 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 TMEM79Q9BSE2 394 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 TTYH3Q9C0H2 523 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 PIGVQ9NUD9 493 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 MAGEA13PA6NCF6 341 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 SRPRAP08240 638 aaKnown RBP15.43■□□□□ 0.06
NEDD4-202ENST00000435532 BST1Q10588 318 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 TMEM154Q6P9G4 183 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 ZYG11AQ6WRX3 759 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 DEF8Q6ZN54 512 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 GJD3Q8N144 294 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 SPOCK2Q92563 424 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 FOXJ1Q92949 421 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 MCOLN1Q9GZU1 580 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 SMG9Q9H0W8 520 aaKnown RBP15.43■□□□□ 0.06
NEDD4-202ENST00000435532 SERHL2Q9H4I8 314 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 SERHLQ9NQF3 203 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 CLN6Q9NWW5 311 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 ZDHHC7Q9NXF8 308 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 FAM25AB3EWG3 89 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 FAM25CB3EWG5 89 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 FAM25GB3EWG6 89 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 ZNF217O75362 1048 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 CA3P07451 260 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 NUP62P37198 522 aaPredicted RBP15.43■□□□□ 0.06
NEDD4-202ENST00000435532 EIF4HQ15056 248 aaKnown RBP15.43■□□□□ 0.06
NEDD4-202ENST00000435532 FBXO43Q4G163 708 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 RPAINQ86UA6 219 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 ZNF641Q96N77 438 aaPredicted RBP15.43■□□□□ 0.06
NEDD4-202ENST00000435532 PCDHB3Q9Y5E6 796 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 ARL5AQ9Y689 179 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 COCHO43405 550 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 UBTFL6P0CB48 400 aaPredicted RBP15.43■□□□□ 0.06
NEDD4-202ENST00000435532 C1QTNF8P60827 252 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 PSME3P61289 254 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 OFCC1Q8IZS5 231 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 DEPDC4Q8N2C3 294 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 VEGFDO43915 354 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 HLA-DQB2P05538 268 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 ATP1B2P14415 290 aaPredicted RBP15.43■□□□□ 0.06
NEDD4-202ENST00000435532 ATXN1P54253 815 aaKnown RBP15.43■□□□□ 0.06
NEDD4-202ENST00000435532 ITGA1P56199 1179 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 SPIBQ01892 262 aa15.43■□□□□ 0.06
NEDD4-202ENST00000435532 PUS10Q3MIT2 529 aaKnown RBP15.43■□□□□ 0.06
NEDD4-202ENST00000435532 RTL10Q7L3V2 364 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms