RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 RMDN1Q96DB5 314 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 CDHR1Q96JP9 859 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 B3GNT4Q9C0J1 378 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 GBA2Q9HCG7 927 aaPredicted RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 PCDHGB6Q9Y5F9 930 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 MAGEB16A2A368 324 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 SAGE2PA6NJ88 616 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 YDJCA8MPS7 323 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 LOC110117498-PIK3R3F6TDL0 507 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 DPYSL4O14531 572 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 CTDSP2O14595 271 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 CILPO75339 1184 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 C1RP00736 705 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 NR3C2P08235 984 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 VDRP11473 427 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 RRM2P31350 389 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 GHRHRQ02643 423 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 GTF2H3Q13889 308 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 DPYSL2Q16555 572 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 LRRC26Q2I0M4 334 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 RNF219Q5W0B1 726 aaPredicted RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 DENND5AQ6IQ26 1287 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 HACD2Q6Y1H2 254 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 CDCA5Q96FF9 252 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 CHCHD6Q9BRQ6 235 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 CARS2Q9HA77 564 aaKnown RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 PDLIM7Q9NR12 457 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 TSR3Q9UJK0 312 aaKnown RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 FBXO10Q9UK96 956 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 FBXO5Q9UKT4 447 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 PCDHB14Q9Y5E9 798 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 AKR7A2O43488 359 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 TPPPO94811 219 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 AP2A1O95782 977 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 KRT6AP02538 564 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 KRT6BP04259 564 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 SH3BP2P78314 561 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 NRG1Q02297 640 aaPredicted RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 TYSND1Q2T9J0 566 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 XKR3Q5GH77 459 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 DCP1BQ8IZD4 617 aaKnown RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 GALNT6Q8NCL4 622 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 NCLNQ969V3 563 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 CELF6Q96J87 481 aaKnown RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 PORCNQ9H237 461 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 UBA2Q9UBT2 640 aaPredicted RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 ORC6Q9Y5N6 252 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 FAM25AB3EWG3 89 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 FAM25CB3EWG5 89 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 FAM25GB3EWG6 89 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 TSPAN4O14817 238 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 MT-CYBP00156 380 aaPredicted RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 PRKACAP17612 351 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 GADD45AP24522 165 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 PTPN3P26045 913 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 SYPL2Q5VXT5 272 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 LAIR1Q6GTX8 287 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 RNF139Q8WU17 664 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 TWIST2Q8WVJ9 160 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 ANKRD49Q8WVL7 239 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 SCN3BQ9NY72 215 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 SESN1Q9Y6P5 492 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 HAT1O14929 419 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 POLR1CO15160 346 aaPredicted RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 ICAM1P05362 532 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 CYP2A7P20853 494 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 CD6P30203 668 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 SLC1A2P43004 574 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 SLC15A1P46059 708 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 GRPEL2Q8TAA5 225 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 PRMT6Q96LA8 375 aaPredicted RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 MLPHQ9BV36 600 aaPredicted RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 MRPL9Q9BYD2 267 aaKnown RBP7.38□□□□□ -1.23
CPSF6-202ENST00000435070 C8orf4Q9NR00 106 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 SLC13A4Q9UKG4 626 aa7.38□□□□□ -1.23
CPSF6-202ENST00000435070 GRK3P35626 688 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 YWHAHQ04917 246 aaPredicted RBP7.37□□□□□ -1.23
CPSF6-202ENST00000435070 STK11Q15831 433 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 GPR158Q5T848 1215 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 TMEM179BQ7Z7N9 219 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 HORMAD1Q86X24 394 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 HPDLQ96IR7 371 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 TRNT1Q96Q11 434 aaKnown RBP7.37□□□□□ -1.23
CPSF6-202ENST00000435070 MRPL4Q9BYD3 311 aaKnown RBP7.37□□□□□ -1.23
CPSF6-202ENST00000435070 MYO1GB0I1T2 1018 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 E5RI56 91 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 NOS1APO75052 506 aaPredicted RBP7.37□□□□□ -1.23
CPSF6-202ENST00000435070 PRKCBP05771 671 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 CPB1P15086 417 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 UBE3AQ05086 875 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 PFKFB4Q16877 469 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 NOXA1Q86UR1 476 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 RAB43Q86YS6 212 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 UBQLNLQ8IYU4 475 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 SIMC1Q8NDZ2 872 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 RASSF5Q8WWW0 418 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 YIPF6Q96EC8 236 aa7.37□□□□□ -1.23
CPSF6-202ENST00000435070 AURKBQ96GD4 344 aaPredicted RBP7.37□□□□□ -1.23
CPSF6-202ENST00000435070 THUMPD3Q9BV44 507 aaKnown RBP7.37□□□□□ -1.23
CPSF6-202ENST00000435070 GSTO2Q9H4Y5 243 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms