RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 OR52K2Q8NGK3 314 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 GAB3Q8WWW8 586 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 PSMG2Q969U7 264 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 TMEM125Q96AQ2 219 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CDKN2AIPNLQ96HQ2 116 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 C3orf30Q96M34 536 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 RDH12Q96NR8 316 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 PLEKHG4BQ96PX9 1271 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SEMA3CQ99985 751 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 KCTD14Q9BQ13 255 aaPredicted RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 PAAF1Q9BRP4 392 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 BDH2Q9BUT1 245 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 BRINP2Q9C0B6 783 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 MAGEH1Q9H213 219 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ALG2Q9H553 416 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 TLR8Q9NR97 1041 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 TBCCD1Q9NVR7 557 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 AIG1Q9NVV5 245 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 POLR3BQ9NW08 1133 aaPredicted RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CMTM6Q9NX76 183 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SMPD3Q9NY59 655 aaPredicted RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 MARCH4Q9P2E8 410 aaPredicted RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CACNG4Q9UBN1 327 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SEPT3Q9UH03 358 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 POLG2Q9UHN1 485 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ZNHIT2Q9UHR6 403 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 MAGEL2Q9UJ55 1249 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CDH7Q9ULB5 785 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 PADI3Q9ULW8 664 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 PCDHGB4Q9UN71 923 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CRYL1Q9Y2S2 319 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 PCDHGB5Q9Y5G0 923 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 WDFY3Q8IZQ1 3526 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 A0A1B0GVG6 124 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 TMEM221A6NGB7 291 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 M0R296 226 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 FXYD1O00168 92 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ARNTLO00327 626 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SOCS2O14508 198 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ARPC2O15144 300 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CLOCKO15516 846 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 GDF9O60383 454 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 NOL3O60936 208 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 KATNA1O75449 491 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 GMNNO75496 209 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 LDLRP01130 860 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 IGLV3-27P01718 113 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SLC4A1P02730 911 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ENO2P09104 434 aaPredicted RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 HAPLN1P10915 354 aaPredicted RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CKMT2P17540 419 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 HDCP19113 662 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CAPN3P20807 821 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 EEF1DP29692 281 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 RFC2P35250 354 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CAPGP40121 348 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 TTPAP49638 278 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 AFF1P51825 1210 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ADARP55265 1226 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CDH13P55290 713 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 MAXP61244 160 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 EMX2Q04743 252 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 OR4D1Q15615 310 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SMAD2Q15796 467 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CYP51A1Q16850 503 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 PUS10Q3MIT2 529 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SLC39A12Q504Y0 691 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 XKR7Q5GH72 579 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 NOMO2Q5JPE7 1267 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 AARS2Q5JTZ9 985 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 GDF6Q6KF10 455 aaPredicted RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SPPL2CQ8IUH8 684 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 STK40Q8N2I9 435 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF786Q8N393 782 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 RYBPQ8N488 228 aaPredicted RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CARNMT1Q8N4J0 409 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 DPP10Q8N608 796 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 OR9I1Q8NGQ6 314 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 BLOC1S5Q8TDH9 187 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 PPP1R13LQ8WUF5 828 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 DNAJC1Q96KC8 554 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SPATA17Q96L03 361 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CEP295NLQ96MC4 621 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 FAM210AQ96ND0 272 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 KLHL5Q96PQ7 755 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 MGME1Q9BQP7 344 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 OSBPL6Q9BZF3 934 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 FBRSL1Q9HCM7 1045 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SLC52A3Q9NQ40 469 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 DDX18Q9NVP1 670 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 GMIPQ9P107 970 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 HSFX1Q9UBD0 423 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF639Q9UID6 485 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 TNPO3Q9Y5L0 923 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 OAS3Q9Y6K5 1087 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 PATJQ8NI35 1801 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 FASNP49327 2511 aaKnown RBP8.6□□□□□ -1.03
GABPB1-205ENST00000429662 KIAA1671Q9BY89 1806 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 ATP6AP2A0A1C7CYW4 349 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 TCRBV5S2A0A599 114 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms