RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ZNF37AP17032 561 aaPredicted RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 FUT4P22083 530 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 SLC6A2P23975 617 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 POLR2JP52435 117 aaKnown RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 PFKPQ01813 784 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 BOP1Q14137 746 aaKnown RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 SELPLGQ14242 412 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 SF1Q15637 639 aaKnown RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 MEP1AQ16819 746 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 VARS2Q5ST30 1063 aaKnown RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 C1orf53Q5VUE5 145 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 FAM45BPQ6NSW5 357 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 PIWIL3Q7Z3Z3 882 aaKnown RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 SYVN1Q86TM6 617 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 RNF175Q8N4F7 328 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 TMCO5AQ8N6Q1 288 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 FAM45AQ8TCE6 357 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 IL12RB2Q99665 862 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 TDRD1Q9BXT4 1180 aaKnown RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 NOL6Q9H6R4 1146 aaKnown RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 A0A087WXM4 84 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 FTH1P02794 183 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 COL6A2P12110 1019 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 CD1DP15813 335 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 RPS9P46781 194 aaKnown RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 IL2P60568 153 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 CYP4F2P78329 520 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 CYP4F3Q08477 520 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 FAM174BQ3ZCQ3 159 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 ARTNQ5T4W7 220 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 RNF219Q5W0B1 726 aaPredicted RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 GALNT18Q6P9A2 607 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 TBPL2Q6SJ96 375 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 ZC3H7AQ8IWR0 971 aaKnown RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 KRTCAP2Q8N6L1 136 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 PGAP3Q96FM1 320 aaPredicted RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 OLAHQ9NV23 265 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 DNAAF2Q9NVR5 837 aaKnown RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 LMCD1Q9NZU5 365 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 CD84Q9UIB8 345 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 PCDHB5Q9Y5E4 795 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.21□□□□□ -0.29
USP42-203ENST00000426246 A0A0J9YVX5 310 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 DENRO43583 198 aaKnown RBP13.21□□□□□ -0.29
USP42-203ENST00000426246 XPNPEP2O43895 674 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 ATE1O95260 518 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 CD247P20963 164 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 MTHFRP42898 656 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 ZNF177Q13360 481 aaPredicted RBP13.21□□□□□ -0.29
USP42-203ENST00000426246 GPRIN3Q6ZVF9 776 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 MON1AQ86VX9 555 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 CACUL1Q86Y37 369 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 SLC44A2Q8IWA5 706 aaPredicted RBP13.21□□□□□ -0.29
USP42-203ENST00000426246 ZDHHC7Q9NXF8 308 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 UBA2Q9UBT2 640 aaPredicted RBP13.21□□□□□ -0.29
USP42-203ENST00000426246 BAG5Q9UL15 447 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 SH3BP5O60239 455 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 DFNA5O60443 496 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 CST1P01037 141 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 PSMB9P28065 219 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 RHOAP61586 193 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 XIAPP98170 497 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 PLD1Q13393 1074 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 AARS2Q5JTZ9 985 aaKnown RBP13.21□□□□□ -0.29
USP42-203ENST00000426246 TMEM173Q86WV6 379 aaPredicted RBP13.21□□□□□ -0.29
USP42-203ENST00000426246 AUTS2Q8WXX7 1259 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 GLMNQ92990 594 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 TPD52L3Q96J77 140 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 FEM1CQ96JP0 617 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 GPR62Q9BZJ7 368 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 POLR3BQ9NW08 1133 aaPredicted RBP13.21□□□□□ -0.29
USP42-203ENST00000426246 SELENONQ9NZV5 590 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 CEPT1Q9Y6K0 416 aa13.21□□□□□ -0.29
USP42-203ENST00000426246 ATP6V1G1O75348 118 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 C21orf59P57076 290 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 NANOGP8Q6NSW7 305 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 DCP1BQ8IZD4 617 aaKnown RBP13.21□□□□□ -0.3
USP42-203ENST00000426246 FAM86B1Q8N7N1 296 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 LMNTD1Q8N9Z9 388 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 BIRC7Q96CA5 298 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 BOCQ9BWV1 1114 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 EBPLQ9BY08 206 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 CIPCQ9C0C6 399 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 ATG10Q9H0Y0 220 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 IPPKQ9H8X2 491 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 ACTR8Q9H981 624 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 NANOGQ9H9S0 305 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 TREX1Q9NSU2 369 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 ST14Q9Y5Y6 855 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 PTPRSQ13332 1948 aa13.21□□□□□ -0.3
USP42-203ENST00000426246 TARM1B6A8C7 271 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 IGLV3-25P01717 112 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 GJA1P17302 382 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 LCP2Q13094 533 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 TCEA2Q15560 299 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 CYP27C1Q4G0S4 372 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 SZRD1Q7Z422 152 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 BCL7CQ8WUZ0 217 aaPredicted RBP13.2□□□□□ -0.3
USP42-203ENST00000426246 ISOC1Q96CN7 298 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 TOX2Q96NM4 488 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms