RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TRIM42Q8IWZ5 723 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 ZBTB2Q8N680 514 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 ACVR1CQ8NER5 493 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 STAG3L4Q8TBR4 150 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 RDH11Q8TC12 318 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 DENND1AQ8TEH3 1009 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 BIRC7Q96CA5 298 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 SCYL1Q96KG9 808 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 LINC00615Q96LM1 132 aaPredicted RBP10.18□□□□□ -0.78
MDC1-205ENST00000425072 PAIP2Q9BPZ3 127 aaKnown RBP10.18□□□□□ -0.78
MDC1-205ENST00000425072 MRPL57Q9BQC6 102 aaKnown RBP10.18□□□□□ -0.78
MDC1-205ENST00000425072 TPSD1Q9BZJ3 242 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 DERL2Q9GZP9 239 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 OR2AG1Q9H205 316 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 TFB2MQ9H5Q4 396 aaKnown RBP10.18□□□□□ -0.78
MDC1-205ENST00000425072 C6orf106Q9H6K1 298 aaPredicted RBP10.18□□□□□ -0.78
MDC1-205ENST00000425072 SARS2Q9NP81 518 aaKnown RBP10.18□□□□□ -0.78
MDC1-205ENST00000425072 C2orf42Q9NWW7 574 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 ATXN10Q9UBB4 475 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 PRSS21Q9Y6M0 314 aa10.18□□□□□ -0.78
MDC1-205ENST00000425072 PKD1L2Q7Z442 2459 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 C10orf142B7Z368 130 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 LIN7AO14910 233 aaPredicted RBP10.17□□□□□ -0.78
MDC1-205ENST00000425072 CHUKO15111 745 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 BIRC5O15392 142 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 GPR39O43194 453 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 GRID2O43424 1007 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 POP7O75817 140 aaKnown RBP10.17□□□□□ -0.78
MDC1-205ENST00000425072 CHN1P15882 459 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 VCLP18206 1134 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 TAC1P20366 129 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 CD27P26842 260 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 CA5AP35218 305 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 MDH1P40925 334 aaKnown RBP10.17□□□□□ -0.78
MDC1-205ENST00000425072 RABIFP47224 123 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 PRLHRP49683 370 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 ATP1A2P50993 1020 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 THOP1P52888 689 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 PRKAA2P54646 552 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 PPP2CBP62714 309 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 PPP2CAP67775 309 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 TIAL1Q01085 375 aaKnown RBP eCLIP10.17□□□□□ -0.78
MDC1-205ENST00000425072 OVGP1Q12889 678 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 CSHL1Q14406 222 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 N4BP2L1Q5TBK1 243 aaPredicted RBP10.17□□□□□ -0.78
MDC1-205ENST00000425072 CWF19L1Q69YN2 538 aaKnown RBP10.17□□□□□ -0.78
MDC1-205ENST00000425072 LVRNQ6Q4G3 990 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 NEK10Q6ZWH5 1172 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 DET1Q7L5Y6 550 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 LRRTM4Q86VH4 590 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 AMZ2Q86W34 360 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 LONP2Q86WA8 852 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 TRAPPC5Q8IUR0 188 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 C1orf210Q8IVY1 113 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 MYO1HQ8N1T3 1032 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 BEND7Q8N7W2 519 aaPredicted RBP10.17□□□□□ -0.78
MDC1-205ENST00000425072 ANKRD42Q8N9B4 389 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 CCDC63Q8NA47 563 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 RHEBL1Q8TAI7 183 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 EEF1AKMT1Q8WVE0 214 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 RLN3Q8WXF3 142 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 ELMO1Q92556 727 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 FUBP1Q96AE4 644 aaKnown RBP10.17□□□□□ -0.78
MDC1-205ENST00000425072 SKA1Q96BD8 255 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 NXNL1Q96CM4 212 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 CCDC126Q96EE4 140 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 BMFQ96LC9 184 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 TRIM54Q9BYV2 358 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 TMEM216Q9P0N5 145 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 ZNHIT2Q9UHR6 403 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 ADAM21Q9UKJ8 722 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 FBXO4Q9UKT5 387 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 TMCO1Q9UM00 188 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.17□□□□□ -0.78
MDC1-205ENST00000425072 CACNA1IQ9P0X4 2223 aa10.17□□□□□ -0.78
MDC1-205ENST00000425072 TRIOO75962 3097 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 MGAT4DA6NG13 374 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 OR2AG2A6NM03 316 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 SYCE1LA8MT33 242 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 IQCF5A8MTL0 148 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 RAD51BO15315 384 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 PLIN3O60664 434 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 MTX2O75431 263 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 SLCO2B1O94956 709 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 WISP3O95389 354 aaPredicted RBP10.16□□□□□ -0.78
MDC1-205ENST00000425072 IGHV4-34P06331 123 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 F7P08709 466 aaPredicted RBP10.16□□□□□ -0.78
MDC1-205ENST00000425072 TPBGLP0DKB5 382 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 MPC1LP0DKB6 136 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 CPA3P15088 417 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 ZNF37AP17032 561 aaPredicted RBP10.16□□□□□ -0.78
MDC1-205ENST00000425072 ZNF8P17098 575 aaPredicted RBP10.16□□□□□ -0.78
MDC1-205ENST00000425072 ITGB6P18564 788 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 CNR2P34972 360 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 PXNP49023 591 aaPredicted RBP10.16□□□□□ -0.78
MDC1-205ENST00000425072 KIAA1024LP59773 190 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 ARHGAP8P85298 464 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 RPL6Q02878 288 aaKnown RBP10.16□□□□□ -0.78
MDC1-205ENST00000425072 HSPA14Q0VDF9 509 aa10.16□□□□□ -0.78
MDC1-205ENST00000425072 RPA4Q13156 261 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms