RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 IL31RAQ8NI17 732 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 ASB9Q96DX5 294 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 PIWIL1Q96J94 861 aaKnown RBP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 NSMCE3Q96MG7 304 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 ADAM2Q99965 735 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 MED11Q9P086 117 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 FETUBQ9UGM5 382 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 TCAF1Q9Y4C2 921 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 ZNF536O15090 1300 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 IFNA7P01567 189 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 PTPRAP18433 802 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 KLRC2P26717 231 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 ADORA2AP29274 412 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 ASMTP46597 345 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 TRMT10BQ6PF06 316 aaKnown RBP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 LINGO2Q7L985 606 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 CRYBG2Q8N1P7 616 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 MPP5Q8N3R9 675 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 COPS5Q92905 334 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 ZC3H10Q96K80 434 aaKnown RBP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 P2RX7Q99572 595 aaKnown RBP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 DNAJC11Q9NVH1 559 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 CPA4Q9UI42 421 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 CNTN6Q9UQ52 1028 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 MAGEB3O15480 346 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 REM1O75628 298 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 C4BPAP04003 597 aaKnown RBP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 SLC18A2Q05940 514 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 DNASE1L3Q13609 305 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 TMEM198Q66K66 360 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 FRRS1Q6ZNA5 592 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 CHSY3Q70JA7 882 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 PPP1R16AQ96I34 528 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 NUDT4Q9NZJ9 180 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 PLCL2Q9UPR0 1127 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 STXBP5LQ9Y2K9 1186 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 COL3A1P02461 1466 aaPredicted RBP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 I3L521 148 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 ACOX3O15254 700 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 PRAMEF1O95521 474 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 SLC2A2P11168 524 aaPredicted RBP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 RPL26P61254 145 aaKnown RBP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 SH3D19Q5HYK7 790 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 BRMS1LQ5PSV4 323 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 EEF1DP3Q658K8 133 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 GALNTL5Q7Z4T8 443 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 ZBTB2Q8N680 514 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 CANT1Q8WVQ1 401 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 RFKQ969G6 155 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 PKP2Q99959 881 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 IDI2Q9BXS1 227 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 SPON1Q9HCB6 807 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 PAK6Q9NQU5 681 aaPredicted RBP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 TRPS1Q9UHF7 1281 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 ASF1AQ9Y294 204 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 IQGAP1P46940 1657 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 MAP2P11137 1827 aaKnown RBP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 CCL22O00626 93 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 CDC40O60508 579 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 SCN2BO60939 215 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 CES1P23141 567 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 ALG11Q2TAA5 492 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 PLEKHG4Q58EX7 1191 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 ESRP1Q6NXG1 681 aaKnown RBP12.22□□□□□ -0.45
CLCN4-203ENST00000421085 JAZF1Q86VZ6 243 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 SPATA22Q8NHS9 363 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 ZFAND2BQ8WV99 257 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 DCSTAMPQ9H295 470 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 DIP2AQ14689 1571 aa12.22□□□□□ -0.45
CLCN4-203ENST00000421085 A0A075B6Q4 140 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 STK16O75716 305 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 MYCLP1P12525 358 aaPredicted RBP12.21□□□□□ -0.45
CLCN4-203ENST00000421085 IRF9Q00978 393 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 FUT2Q10981 343 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 RFTN2Q52LD8 501 aaPredicted RBP12.21□□□□□ -0.45
CLCN4-203ENST00000421085 LCLAT1Q6UWP7 414 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 OR6K2Q8NGY2 324 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 C12orf43Q96C57 262 aaKnown RBP12.21□□□□□ -0.45
CLCN4-203ENST00000421085 FAM163AQ96GL9 167 aaPredicted RBP12.21□□□□□ -0.45
CLCN4-203ENST00000421085 POLR2J2Q9GZM3 115 aaKnown RBP12.21□□□□□ -0.45
CLCN4-203ENST00000421085 EHD1Q9H4M9 534 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 AMBNQ9NP70 447 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 STARD7Q9NQZ5 370 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 RGS17Q9UGC6 210 aaPredicted RBP12.21□□□□□ -0.45
CLCN4-203ENST00000421085 PCDHB1Q9Y5F3 818 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 AGLP35573 1532 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.21□□□□□ -0.45
CLCN4-203ENST00000421085 TPST2O60704 377 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 CYP11A1P05108 521 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 ANXA4P09525 319 aaPredicted RBP12.21□□□□□ -0.45
CLCN4-203ENST00000421085 ITGB5P18084 799 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 CBX5P45973 191 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 EVX2Q03828 476 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 ZNF234Q14588 700 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 MPPE1Q53F39 396 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 SFT2D3Q587I9 215 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 TPRG1LQ5T0D9 272 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 DCLRE1AQ6PJP8 1040 aa12.21□□□□□ -0.45
CLCN4-203ENST00000421085 RTL4Q6ZR62 310 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms