RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SPO11Q9Y5K1 396 aa16.51■□□□□ 0.23
UPF3AP3-201ENST00000420996 LRRD1A4D1F6 860 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 C3orf70A6NLC5 250 aaPredicted RBP16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 APOL1O14791 398 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 PPP1R12AO14974 1030 aaPredicted RBP16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 AGFG2O95081 481 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 EBLN1P0CF75 366 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 GNLYP22749 145 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 PGDP52209 483 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 RPS15P62841 145 aaKnown RBP16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 FANCCQ00597 558 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 PDE1BQ01064 536 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 RPE65Q16518 533 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 TEX44Q53QW1 395 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 ZDHHC20Q5W0Z9 365 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 GPR150Q8NGU9 434 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 DTX3LQ8TDB6 740 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 ZNF514Q96K75 400 aaPredicted RBP16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 OLFM3Q96PB7 478 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 MAP3K3Q99759 626 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 SLC25A23Q9BV35 468 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 MAK16Q9BXY0 300 aaKnown RBP16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 ZCCHC2Q9C0B9 1178 aaKnown RBP16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 TRABDQ9H4I3 376 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 MLXIPLQ9NP71 852 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 DNMT3AQ9Y6K1 912 aaPredicted RBP16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 ICE1Q9Y2F5 2266 aa16.5■□□□□ 0.23
UPF3AP3-201ENST00000420996 A0A0A6YYK5 440 aaPredicted RBP16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 TLCD2A6NGC4 264 aa16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 PMPCBO75439 489 aa16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 POP7O75817 140 aaKnown RBP16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 ZFXP17010 805 aaPredicted RBP16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 ARL4DP49703 201 aa16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 UBASH3AP57075 661 aa16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 RPS18P62269 152 aaKnown RBP16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 HSD11B2P80365 405 aa16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 LAMB3Q13751 1172 aa16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 D2HGDHQ8N465 521 aa16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 RASGEF1AQ8N9B8 481 aa16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 IL26Q9NPH9 171 aa16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 ACSS2Q9NR19 701 aa16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 PLEKHB1Q9UF11 243 aaPredicted RBP16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 MED13Q9UHV7 2174 aa16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 PSMD13Q9UNM6 376 aa16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 FARSAQ9Y285 508 aaKnown RBP16.49■□□□□ 0.23
UPF3AP3-201ENST00000420996 SPTBN1Q01082 2364 aaKnown RBP16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 UBA6A0AVT1 1052 aaPredicted RBP16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 OR5K3A6NET4 321 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 CPNE3O75131 537 aaKnown RBP16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 CCL11P51671 97 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 CTSCP53634 463 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 TUBB4BP68371 445 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 TUBB2AQ13885 445 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 MESDQ14696 234 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 PLCL1Q15111 1095 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 NADK2Q4G0N4 442 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 DNTTIP2Q5QJE6 756 aaKnown RBP16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 LDLRAP1Q5SW96 308 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 PAPD7Q5XG87 772 aaKnown RBP16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 CPZQ66K79 652 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 NPNTQ6UXI9 565 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 CERS6Q6ZMG9 384 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 ZNF517Q6ZMY9 492 aaPredicted RBP16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 FAM83HQ6ZRV2 1179 aaPredicted RBP16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 TTC30BQ8N4P2 665 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 OR8K5Q8NH50 307 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 TEKT5Q96M29 485 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 TUBB2BQ9BVA1 445 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 PACSIN1Q9BY11 444 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 ING2Q9H160 280 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 KCND1Q9NSA2 647 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 MAP4K5Q9Y4K4 846 aa16.48■□□□□ 0.23
UPF3AP3-201ENST00000420996 SHANK1Q9Y566 2161 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 LOC285095A0A1B0GVY8 99 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 UGT1A9O60656 530 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 SCRG1O75711 98 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 EPOP01588 193 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 GYPCP04921 128 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 MTHFD1P11586 935 aaKnown RBP16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 UGT1A6P19224 532 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 LPOP22079 712 aaPredicted RBP16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 UGT1A1P22309 533 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 UGT1A4P22310 534 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 PTPN3P26045 913 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 SPAM1P38567 509 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 TPM4P67936 248 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 CHAF1BQ13112 559 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 IL10RAQ13651 578 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 NFE2L1Q14494 772 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 CHRNA6Q15825 494 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 SLC18A3Q16572 532 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 METRNLQ641Q3 311 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 HIST2H2BCQ6DN03 193 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 TMEM220Q6QAJ8 160 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 B4GALNT4Q76KP1 1039 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 DDHD1Q8NEL9 900 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 SSC4DQ8WTU2 575 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 ZFPM2Q8WW38 1151 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 MR1Q95460 341 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms