RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.84□□□□□ -0.67
SSBP3-206ENST00000420121 KLHL3Q9UH77 587 aa10.84□□□□□ -0.67
SSBP3-206ENST00000420121 PILRAQ9UKJ1 303 aa10.84□□□□□ -0.67
SSBP3-206ENST00000420121 PACSIN2Q9UNF0 486 aaPredicted RBP10.84□□□□□ -0.67
SSBP3-206ENST00000420121 TCRBV7S2A1N4TA0A589 114 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 MACROD2A1Z1Q3 448 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 OR2AG2A6NM03 316 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 PDZK1P1A8MUH7 402 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 STX7O15400 261 aaKnown RBP10.83□□□□□ -0.68
SSBP3-206ENST00000420121 POP7O75817 140 aaKnown RBP10.83□□□□□ -0.68
SSBP3-206ENST00000420121 UBXN7O94888 489 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 PRAMEF1O95521 474 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 VIPP01282 170 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 PLA2G2AP14555 144 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 LIFP15018 202 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 TYRP1P17643 537 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 LPOP22079 712 aaPredicted RBP10.83□□□□□ -0.68
SSBP3-206ENST00000420121 IDSP22304 550 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 LEPRP48357 1165 aaKnown RBP10.83□□□□□ -0.68
SSBP3-206ENST00000420121 RAB15P59190 212 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 ITGA9Q13797 1035 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 NFE2L1Q14494 772 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 DCAF12Q5T6F0 453 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 CCDC181Q5TID7 509 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 KCTD11Q693B1 232 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 TMEM220Q6QAJ8 160 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 PLXDC1Q8IUK5 500 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 BEND7Q8N7W2 519 aaPredicted RBP10.83□□□□□ -0.68
SSBP3-206ENST00000420121 CCDC112Q8NEF3 446 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 OR4K2Q8NGD2 314 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 OR13C4Q8NGS5 318 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 GDAP1Q8TB36 358 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 ZNF398Q8TD17 642 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 EXTL1Q92935 676 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 MED8Q96G25 268 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 C9orf72Q96LT7 481 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 BAG1Q99933 345 aaPredicted RBP10.83□□□□□ -0.68
SSBP3-206ENST00000420121 DESI2Q9BSY9 194 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 ASPSCR1Q9BZE9 553 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 ARNT2Q9HBZ2 717 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 FKBPLQ9UIM3 349 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 R3HDM2Q9Y2K5 976 aaKnown RBP10.83□□□□□ -0.68
SSBP3-206ENST00000420121 PKP3Q9Y446 797 aa10.83□□□□□ -0.68
SSBP3-206ENST00000420121 TMEM184BQ9Y519 407 aaPredicted RBP10.83□□□□□ -0.68
SSBP3-206ENST00000420121 C5orf60A6NFR6 353 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 CAPN5O15484 640 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-206ENST00000420121 LDB2O43679 373 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 KIF1CO43896 1103 aaKnown RBP10.82□□□□□ -0.68
SSBP3-206ENST00000420121 RAD1O60671 282 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 KCNJ13O60928 360 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 SRP72O76094 671 aaKnown RBP10.82□□□□□ -0.68
SSBP3-206ENST00000420121 TJP3O95049 919 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 DLGAP3O95886 979 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 FTCDO95954 541 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 ITGB2P05107 769 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 CAPZBP47756 277 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 ZNF140P52738 457 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-206ENST00000420121 GDF10P55107 478 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 NAP1L1P55209 391 aaKnown RBP10.82□□□□□ -0.68
SSBP3-206ENST00000420121 PPP1CAP62136 330 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 GTF2H3Q13889 308 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 SPARCL1Q14515 664 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 LCE2DQ5TA82 110 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-206ENST00000420121 METRNLQ641Q3 311 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 DARS2Q6PI48 645 aaKnown RBP10.82□□□□□ -0.68
SSBP3-206ENST00000420121 AMZ2Q86W34 360 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 CACNA2D3Q8IZS8 1091 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 SLC35B2Q8TB61 432 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 TEFMQ96QE5 360 aaKnown RBP10.82□□□□□ -0.68
SSBP3-206ENST00000420121 ZMYND15Q9H091 742 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 EPHA6Q9UF33 1036 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 AMFRQ9UKV5 643 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 AAR2Q9Y312 384 aaKnown RBP10.82□□□□□ -0.68
SSBP3-206ENST00000420121 PCDHB11Q9Y5F2 797 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 DNMT3AQ9Y6K1 912 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-206ENST00000420121 CAPN6Q9Y6Q1 641 aa10.82□□□□□ -0.68
SSBP3-206ENST00000420121 SETXQ7Z333 2677 aaKnown RBP10.81□□□□□ -0.68
SSBP3-206ENST00000420121 LOC101059948A0A1B0GTJ6 334 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 TOX3O15405 576 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-206ENST00000420121 IPO7O95373 1038 aaKnown RBP10.81□□□□□ -0.68
SSBP3-206ENST00000420121 METTL18O95568 372 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 ZNF28P17035 718 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 ITGB6P18564 788 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 CDC25BP30305 580 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 TNNT3P45378 269 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-206ENST00000420121 PPM1FP49593 454 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-206ENST00000420121 SH3BP2P78314 561 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 RPE65Q16518 533 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 TBR1Q16650 682 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 ZNF658BQ4V348 819 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-206ENST00000420121 BCL7AQ4VC05 210 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 FNBP1LQ5T0N5 605 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 CEACAM20Q6UY09 585 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 DET1Q7L5Y6 550 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 PEX26Q7Z412 305 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 PRSS42Q7Z5A4 293 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 KIAA1328Q86T90 577 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 TRIM48Q8IWZ4 208 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 RBM12BQ8IXT5 1001 aaKnown RBP10.81□□□□□ -0.68
SSBP3-206ENST00000420121 LILRA3Q8N6C8 439 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms