RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CDKN2AIPNLQ96HQ2 116 aa19.95■□□□□ 0.78
GTF3A-202ENST00000419181 PDLIM2Q96JY6 352 aa19.95■□□□□ 0.78
GTF3A-202ENST00000419181 CCDC74BQ96LY2 380 aa19.95■□□□□ 0.78
GTF3A-202ENST00000419181 COPS8Q99627 209 aa19.95■□□□□ 0.78
GTF3A-202ENST00000419181 FAM96AQ9H5X1 160 aa19.95■□□□□ 0.78
GTF3A-202ENST00000419181 HOMER3Q9NSC5 361 aa19.95■□□□□ 0.78
GTF3A-202ENST00000419181 POT1Q9NUX5 634 aa19.95■□□□□ 0.78
GTF3A-202ENST00000419181 TMEM9Q9P0T7 183 aa19.95■□□□□ 0.78
GTF3A-202ENST00000419181 WDR37Q9Y2I8 494 aa19.95■□□□□ 0.78
GTF3A-202ENST00000419181 PCDHGA7Q9Y5G6 932 aa19.95■□□□□ 0.78
GTF3A-202ENST00000419181 AHCTF1Q8WYP5 2266 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 IGLV3-16A0A075B6K0 115 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 OR52A4PA6NMU1 304 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 VIPP01282 170 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 JMJD7P0C870 316 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 RALBP11234 206 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 ITPKBP27987 946 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 ABCG1P45844 678 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 KCNJ1P48048 391 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 CDKN1CP49918 316 aaPredicted RBP19.94■□□□□ 0.78
GTF3A-202ENST00000419181 CCDC173Q0VFZ6 552 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 NFE2L1Q14494 772 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 CLCA4Q14CN2 919 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 CCDC38Q502W7 563 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 TMEM71Q6P5X7 295 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 WDR74Q6RFH5 385 aaPredicted RBP19.94■□□□□ 0.78
GTF3A-202ENST00000419181 C4orf22Q6V702 233 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 TMEM26Q6ZUK4 368 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 TRIM48Q8IWZ4 208 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 RCBTB1Q8NDN9 531 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 HEXDCQ8WVB3 486 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 DCUN1D1Q96GG9 259 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 PBKQ96KB5 322 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 LINC00615Q96LM1 132 aaPredicted RBP19.94■□□□□ 0.78
GTF3A-202ENST00000419181 EPB41L1Q9H4G0 881 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 CASS4Q9NQ75 786 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 EIF2B3Q9NR50 452 aaKnown RBP19.94■□□□□ 0.78
GTF3A-202ENST00000419181 PDP2Q9P2J9 529 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 PISDQ9UG56 409 aa19.94■□□□□ 0.78
GTF3A-202ENST00000419181 CCDC78A2IDD5 438 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 HEATR9A2RTY3 570 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 KLHL33A6NCF5 533 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 MGAT4DA6NG13 374 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 AGRPO00253 132 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 GAS8O95995 478 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 ITIH1P19827 911 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 ACRV1P26436 265 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 ARSDP51689 593 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 SKIDA1Q1XH10 827 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 ZRANB3Q5FWF4 1079 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 METRNLQ641Q3 311 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 XKR5Q6UX68 686 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 GSTA5Q7RTV2 222 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 PDZD3Q86UT5 571 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 SPACA3Q8IXA5 215 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 OR2L2Q8NH16 312 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 RANBP9Q96S59 729 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 TBC1D10AQ9BXI6 508 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 SLC40A1Q9NP59 571 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 ZDHHC3Q9NYG2 299 aa19.93■□□□□ 0.78
GTF3A-202ENST00000419181 TTC7AQ9ULT0 858 aaPredicted RBP19.93■□□□□ 0.78
GTF3A-202ENST00000419181 PIKFYVEQ9Y2I7 2098 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 CFAP99D6REC4 459 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 PRSS56P0CW18 603 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 MPSTP25325 297 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 PBLDP30039 288 aaPredicted RBP19.92■□□□□ 0.78
GTF3A-202ENST00000419181 ETV5P41161 510 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 HALP42357 657 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 PRLHRP49683 370 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 TLE3Q04726 772 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 CACNG1Q06432 222 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 LAMB3Q13751 1172 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 SERPINA9Q86WD7 417 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 RBM12BQ8IXT5 1001 aaKnown RBP19.92■□□□□ 0.78
GTF3A-202ENST00000419181 PIANPQ8IYJ0 282 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 SLC35F6Q8N357 371 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 OR13J1Q8NGT2 312 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 ANP32BQ92688 251 aaKnown RBP19.92■□□□□ 0.78
GTF3A-202ENST00000419181 CXorf40BQ96DE9 158 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 ZMYND15Q9H091 742 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 AKAP7Q9P0M2 348 aaPredicted RBP19.92■□□□□ 0.78
GTF3A-202ENST00000419181 RIMKLBQ9ULI2 386 aa19.92■□□□□ 0.78
GTF3A-202ENST00000419181 PRAMEF33A0A0G2JMD5 474 aa19.91■□□□□ 0.78
GTF3A-202ENST00000419181 NVLO15381 856 aaKnown RBP19.91■□□□□ 0.78
GTF3A-202ENST00000419181 ATP1B2P14415 290 aaPredicted RBP19.91■□□□□ 0.78
GTF3A-202ENST00000419181 ADRA1DP25100 572 aa19.91■□□□□ 0.78
GTF3A-202ENST00000419181 MSNP26038 577 aaKnown RBP19.91■□□□□ 0.78
GTF3A-202ENST00000419181 SLC5A2P31639 672 aa19.91■□□□□ 0.78
GTF3A-202ENST00000419181 MAPK9P45984 424 aa19.91■□□□□ 0.78
GTF3A-202ENST00000419181 PPM1FP49593 454 aaPredicted RBP19.91■□□□□ 0.78
GTF3A-202ENST00000419181 BASP1P80723 227 aaKnown RBP19.91■□□□□ 0.78
GTF3A-202ENST00000419181 GPR18Q14330 331 aa19.91■□□□□ 0.78
GTF3A-202ENST00000419181 TAS2R42Q7RTR8 314 aa19.91■□□□□ 0.78
GTF3A-202ENST00000419181 KCNE4Q8WWG9 221 aa19.91■□□□□ 0.78
GTF3A-202ENST00000419181 NCSTNQ92542 709 aa19.91■□□□□ 0.78
GTF3A-202ENST00000419181 NAF1Q96HR8 494 aaKnown RBP19.91■□□□□ 0.78
GTF3A-202ENST00000419181 MS4A14Q96JA4 679 aa19.91■□□□□ 0.78
GTF3A-202ENST00000419181 TRMT1Q9NXH9 659 aaKnown RBP19.91■□□□□ 0.78
GTF3A-202ENST00000419181 OGFRQ9NZT2 677 aa19.91■□□□□ 0.78
GTF3A-202ENST00000419181 ACSL6Q9UKU0 697 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms