RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 FAM205BPQ63HN1 556 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 SCRN2Q96FV2 425 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 SENP5Q96HI0 755 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 ZNF582Q96NG8 517 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 VPS33BQ9H267 617 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 PPIL3Q9H2H8 161 aaKnown RBP4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 GHITMQ9H3K2 345 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 DNAJC18Q9H819 358 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 PELI2Q9HAT8 420 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 GAB2Q9UQC2 676 aa4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.17□□□□□ -1.74
HMGB1P49-201ENST00000418882 A0A1W2PPI3 338 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 ANKRD66B4E2M5 251 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 PAPSS1O43252 624 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 SH3BP5O60239 455 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 SOCS5O75159 536 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 PDE9AO76083 593 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 BMP10O95393 424 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 PRLRP16471 622 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 MSH3P20585 1137 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 ANOS1P23352 680 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 HOXD13P35453 343 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 CRIP2P52943 208 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 DRG2P55039 364 aaKnown RBP4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 PSMC6P62333 389 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 KIR2DS3Q14952 304 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 DUSP28Q4G0W2 176 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 SZRD1Q7Z422 152 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 LONP2Q86WA8 852 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 TEX11Q8IYF3 940 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 ABHD8Q96I13 439 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 NUDCD1Q96RS6 583 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 NCAPGQ9BPX3 1015 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 ZNF696Q9H7X3 374 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 UPF2Q9HAU5 1272 aaKnown RBP4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 SCRT2Q9NQ03 307 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 WSB2Q9NYS7 404 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 PTTG2Q9NZH5 202 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 TBC1D29Q9UFV1 150 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 YIPF1Q9Y548 306 aa4.16□□□□□ -1.74
HMGB1P49-201ENST00000418882 FSD2A1L4K1 749 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 TMCC2O75069 709 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 ZBED4O75132 1171 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 GAS8-AS1O95177 125 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 TSHBP01222 138 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 ZNF23P17027 643 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 CBLP22681 906 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 CREB5Q02930 508 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 TECRLQ5HYJ1 363 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 RAB41Q5JT25 222 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 CCNYL2Q5T2Q4 361 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 ARHGAP17Q68EM7 881 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 PACS1Q6VY07 963 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 PTOV1Q86YD1 416 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 OLIG1Q8TAK6 271 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 ZNF473Q8WTR7 871 aaKnown RBP4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 SMPDL3BQ92485 455 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 SEMA4DQ92854 862 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 FAM120BQ96EK7 910 aaKnown RBP4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 PSD2Q9BQI7 771 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 MAF1Q9H063 256 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 MAP3K20Q9NYL2 800 aaKnown RBP4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 DNAJB4Q9UDY4 337 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 PCDHGA5Q9Y5G8 931 aa4.15□□□□□ -1.75
HMGB1P49-201ENST00000418882 A6NCN8 305 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 PMS2P5A8MQ11 134 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 SLC22A2O15244 555 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 ZG16O60844 167 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 MITFO75030 526 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 RSL1D1O76021 490 aaKnown RBP4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 GH2P01242 217 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 PATE4P0C8F1 98 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 PSMB10P40306 273 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 THOP1P52888 689 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 TERF1P54274 439 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 MLLT10P55197 1068 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 MRPS5P82675 430 aaKnown RBP4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 MC1RQ01726 317 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 MRGPRG-AS1Q2M3A8 158 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 ZC2HC1CQ53FD0 456 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 NDUFAF5Q5TEU4 345 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 ZDHHC20Q5W0Z9 365 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 ALS2CLQ60I27 953 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 ARID3BQ8IVW6 561 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 CRYBG2Q8N1P7 616 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 TBC1D16Q8TBP0 767 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 PPP4R1Q8TF05 950 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 LRRC59Q96AG4 307 aaKnown RBP4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 CEP295NLQ96MC4 621 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 DACH2Q96NX9 599 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 TREX2Q9BQ50 279 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 HRH4Q9H3N8 390 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 SUCLA2Q9P2R7 463 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 ACAD8Q9UKU7 415 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 ZNF215Q9UL58 517 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 PLAGL1Q9UM63 463 aa4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 EXO1Q9UQ84 846 aaKnown RBP4.14□□□□□ -1.75
HMGB1P49-201ENST00000418882 A0A1W2PQ09 198 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 LNP1A1A4G5 178 aa4.13□□□□□ -1.75
HMGB1P49-201ENST00000418882 BUD23O43709 281 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms