RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 DNASE1L2Q92874 299 aa16.74■□□□□ 0.27
SYNGAP1-202ENST00000418600 ERP27Q96DN0 273 aa16.74■□□□□ 0.27
SYNGAP1-202ENST00000418600 APOPT1Q96IL0 206 aa16.74■□□□□ 0.27
SYNGAP1-202ENST00000418600 CEP295NLQ96MC4 621 aa16.74■□□□□ 0.27
SYNGAP1-202ENST00000418600 TTC33Q6PID6 262 aaPredicted RBP16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 ZMIZ2Q8NF64 920 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 OR10T2Q8NGX3 314 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 SLC9A6Q92581 669 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 ARMC5Q96C12 935 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 TBATAQ96M53 351 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 ARL5AQ9Y689 179 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 VGLL3A8MV65 326 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 PRAMEF26H0Y7S4 382 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 TOP3BO95985 862 aaKnown RBP16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 ATP1B2P14415 290 aaPredicted RBP16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 HSD17B3P37058 310 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 GYS2P54840 703 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 OVGP1Q12889 678 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 MTAPQ13126 283 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 KDM7AQ6ZMT4 941 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 HDDC2Q7Z4H3 204 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 KCTD4Q8WVF5 259 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 TMEM120AQ9BXJ8 343 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 CPEB1Q9BZB8 566 aaKnown RBP16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 H7C0S8 307 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 NOL4O94818 638 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 NTRK1P04629 796 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 ATP5F1P24539 256 aaPredicted RBP16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 MAPK12P53778 367 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 ERVFC1P60507 584 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 PRMT9Q6P2P2 845 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 FAM180AQ6UWF9 173 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 TMC8Q8IU68 726 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 PBX4Q9BYU1 374 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 CEP44Q9C0F1 390 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 HRASLS2Q9NWW9 162 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 DGKBQ9Y6T7 804 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 TRIM43BA6NCK2 446 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 AP3D1O14617 1153 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 HBQ1P09105 142 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 PBX2P40425 430 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 DRG2P55039 364 aaKnown RBP16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 MRPS21P82921 87 aaKnown RBP16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 TRIM43Q96BQ3 446 aaPredicted RBP16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 ZNF354BQ96LW1 612 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 TRIM8Q9BZR9 551 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 AP4S1Q9Y587 144 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 NAV1Q8NEY1 1877 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 KDM3BQ7LBC6 1761 aa16.73■□□□□ 0.27
SYNGAP1-202ENST00000418600 FBLP22087 321 aaKnown RBP16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 OTX2P32243 289 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 KLC1Q07866 573 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 SNTA1Q13424 505 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 TMC3Q7Z5M5 1100 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 FSTL5Q8N475 847 aaPredicted RBP16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 PLA2G15Q8NCC3 412 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 KLHL6Q8WZ60 621 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 BATF3Q9NR55 127 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 ATXN1P54253 815 aaKnown RBP16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 EXOSC8Q96B26 276 aaKnown RBP16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 SDHAF3Q9NRP4 125 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 TMEM248Q9NWD8 314 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 SAC3D1A6NKF1 404 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 POLR2CP19387 275 aaPredicted RBP16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 IRX1P78414 480 aaPredicted RBP16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 GALNT4Q8N4A0 578 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 ARL14Q8N4G2 192 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 SPATA6LQ8N4H0 392 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 ZNF516Q92618 1163 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 DUSP12Q9UNI6 340 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 SESN1Q9Y6P5 492 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 MBLAC1A4D2B0 266 aaPredicted RBP16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 TALDO1P37837 337 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 SOX4Q06945 474 aaPredicted RBP16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 FAM171BQ6P995 826 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 KRT77Q7Z794 578 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 OLFM1Q99784 485 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 CDADC1Q9BWV3 514 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 KLRF1Q9NZS2 232 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 IFT80Q9P2H3 777 aaPredicted RBP16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 SNX7Q9UNH6 387 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 IGLON5A6NGN9 336 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 BCAT2O15382 392 aaPredicted RBP16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 CNOT3O75175 753 aaKnown RBP16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 TSHRP16473 764 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 FAM153CQ494X1 144 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 TSTD2Q5T7W7 516 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 NIPAL1Q6NVV3 410 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 HFE2Q6ZVN8 426 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 ACTRT2Q8TDY3 377 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 KCNH6Q9H252 994 aa16.72■□□□□ 0.27
SYNGAP1-202ENST00000418600 POLD2P49005 469 aa16.71■□□□□ 0.27
SYNGAP1-202ENST00000418600 RAB28P51157 221 aa16.71■□□□□ 0.27
SYNGAP1-202ENST00000418600 FASTKQ14296 549 aaKnown RBP16.71■□□□□ 0.27
SYNGAP1-202ENST00000418600 CASP12Q6UXS9 341 aa16.71■□□□□ 0.27
SYNGAP1-202ENST00000418600 TRPM8Q7Z2W7 1104 aa16.71■□□□□ 0.27
SYNGAP1-202ENST00000418600 TULP3O75386 442 aa16.71■□□□□ 0.27
SYNGAP1-202ENST00000418600 RGS20O76081 388 aa16.71■□□□□ 0.27
SYNGAP1-202ENST00000418600 PDE9AO76083 593 aa16.71■□□□□ 0.27
SYNGAP1-202ENST00000418600 AP2A1O95782 977 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms