RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 VPS37BQ9H9H4 285 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 CATSPERZQ9NTU4 200 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 SLC23A2Q9UGH3 650 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 DNAJC16Q9Y2G8 782 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 UTP11Q9Y3A2 253 aaKnown RBP13.13□□□□□ -0.31
TMEM248-203ENST00000418375 MRFAP1Q9Y605 127 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 APC2O95996 2303 aa13.13□□□□□ -0.31
TMEM248-203ENST00000418375 GOLGA4Q13439 2230 aaKnown RBP13.13□□□□□ -0.31
TMEM248-203ENST00000418375 ARID1BQ8NFD5 2236 aaPredicted RBP13.13□□□□□ -0.31
TMEM248-203ENST00000418375 CACNA1GO43497 2377 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 FAM237BA0A1B0GVD1 139 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 OR5K4A6NMS3 321 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 QSOX1O00391 747 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 SNX2O60749 519 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 AP2A2O94973 939 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 PRSS56P0CW18 603 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 GLB1P16278 677 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 IDSP22304 550 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 NSG1P42857 185 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 ITGA8P53708 1063 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 B4GALNT1Q00973 533 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 INSM1Q01101 510 aaPredicted RBP13.12□□□□□ -0.31
TMEM248-203ENST00000418375 CALCOCO2Q13137 446 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 HLTFQ14527 1009 aaKnown RBP eCLIP13.12□□□□□ -0.31
TMEM248-203ENST00000418375 KIAA0930Q6ICG6 404 aaPredicted RBP13.12□□□□□ -0.31
TMEM248-203ENST00000418375 CES3Q6UWW8 571 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 C11orf96Q7Z7L8 435 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 PDZD3Q86UT5 571 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 PDIK1LQ8N165 341 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 CACTIN-AS1Q8N1I8 211 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 OTUD6BQ8N6M0 293 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 MAPK15Q8TD08 544 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 ZNF669Q96BR6 464 aaPredicted RBP13.12□□□□□ -0.31
TMEM248-203ENST00000418375 STAMBPL1Q96FJ0 436 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 LINC00615Q96LM1 132 aaPredicted RBP13.12□□□□□ -0.31
TMEM248-203ENST00000418375 NRSN2Q9GZP1 204 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 ABCG4Q9H172 646 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 STN1Q9H668 368 aaKnown RBP13.12□□□□□ -0.31
TMEM248-203ENST00000418375 TBC1D29Q9UFV1 150 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 CLCA2Q9UQC9 943 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 SNX24Q9Y343 169 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 AK5Q9Y6K8 562 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 ACACAQ13085 2346 aa13.12□□□□□ -0.31
TMEM248-203ENST00000418375 ZNF106Q9H2Y7 1883 aaKnown RBP13.11□□□□□ -0.31
TMEM248-203ENST00000418375 A0A087WV48 116 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 KIR2DS5A0A0G2JLQ3 304 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 A0A0G2JNG1 304 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 MGAT4DA6NG13 374 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 RHPN2P1A8MT19 583 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 PDZK1P1A8MUH7 402 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 KIR2DS3K7RE56 304 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 PFDN6O15212 129 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 CD3EAPO15446 510 aaKnown RBP13.11□□□□□ -0.31
TMEM248-203ENST00000418375 ZW10O43264 779 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 NUDT21O43809 227 aaKnown RBP13.11□□□□□ -0.31
TMEM248-203ENST00000418375 USP1O94782 785 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 VAPBO95292 243 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 POLBP06746 335 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
TMEM248-203ENST00000418375 PNLIPP16233 465 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 PBLDP30039 288 aaPredicted RBP13.11□□□□□ -0.31
TMEM248-203ENST00000418375 RPL21P46778 160 aaKnown RBP13.11□□□□□ -0.31
TMEM248-203ENST00000418375 TTPAP49638 278 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 PRLHRP49683 370 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 MAZP56270 477 aaKnown RBP13.11□□□□□ -0.31
TMEM248-203ENST00000418375 ARL4CP56559 192 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 MRPS25P82663 173 aaKnown RBP13.11□□□□□ -0.31
TMEM248-203ENST00000418375 DMPKQ09013 629 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 KIR2DS5Q14953 304 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 RTP5Q14D33 572 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 HIF1AQ16665 826 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 ANKRD20A4Q4UJ75 823 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 MRNIPQ6NTE8 343 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 C8orf74Q6P047 294 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 PACS1Q6VY07 963 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 MICALCLQ6ZW33 695 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 SDCCAG8Q86SQ7 713 aaPredicted RBP13.11□□□□□ -0.31
TMEM248-203ENST00000418375 TMEM135Q86UB9 458 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 C17orf82Q86X59 251 aaPredicted RBP13.11□□□□□ -0.31
TMEM248-203ENST00000418375 NAGSQ8N159 534 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 ARL14Q8N4G2 192 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 DCBLD1Q8N8Z6 715 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 AVL9Q8NBF6 648 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 OR2L2Q8NH16 312 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 CCDC74AQ96AQ1 378 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 SIGLEC10Q96LC7 697 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 DCBLD2Q96PD2 775 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 NAT9Q9BTE0 207 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 DPH5Q9H2P9 285 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 WHRNQ9P202 907 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 LRIT1Q9P2V4 623 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 RPS6KL1Q9Y6S9 549 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 ITPR1Q14643 2758 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 CELSR3Q9NYQ7 3312 aa13.11□□□□□ -0.31
TMEM248-203ENST00000418375 CTAGE15A4D2H0 777 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 A6NCN8 305 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 SGTAO43765 313 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 NDUFS3O75489 264 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 TTC4O95801 387 aa13.1□□□□□ -0.31
TMEM248-203ENST00000418375 MT-CO3P00414 261 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms