RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 ABTB1Q969K4 478 aaPredicted RBP11.56□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 NRBF2Q96F24 287 aa11.56□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 FBXL20Q96IG2 436 aa11.56□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 POLR1BQ9H9Y6 1135 aa11.56□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 STARD7Q9NQZ5 370 aa11.56□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 IKZF3Q9UKT9 509 aa11.56□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 CNPP09543 421 aaKnown RBP11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 CTPS1P17812 591 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 RPL10P27635 214 aaKnown RBP11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ALDH3B2P48448 385 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 SLC11A1P49279 550 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 MTPNP58546 118 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 CACNG1Q06432 222 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 PLCL1Q15111 1095 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 TRIM71Q2Q1W2 868 aaKnown RBP11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ZBED5Q49AG3 693 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 SGO1Q5FBB7 561 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ARMC12Q5T9G4 340 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 STK32CQ86UX6 486 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 FIG4Q92562 907 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 BIRC7Q96CA5 298 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 BRINP2Q9C0B6 783 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 IPPKQ9H8X2 491 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 SLAMF8Q9P0V8 285 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 POLR3HQ9Y535 204 aaPredicted RBP11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 PCDHB1Q9Y5F3 818 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 KLHL33A6NCF5 533 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 KCNH1O95259 989 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 G6PDP11413 515 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 PCNAP12004 261 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 HTR1EP28566 365 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 OR1D2P34982 312 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 FAM189BP81408 668 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 CDH18Q13634 790 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 GTF2H2Q13888 395 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ADGRF1Q5T601 910 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 GTF2H2CQ6P1K8 395 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 CERS6Q6ZMG9 384 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 PATL1Q86TB9 770 aaKnown RBP11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 EPHX4Q8IUS5 362 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 KIAA2013Q8IYS2 634 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 FBXO22Q8NEZ5 403 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 NCLNQ969V3 563 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 PLD4Q96BZ4 506 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 PPP3R2Q96LZ3 170 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 CIPCQ9C0C6 399 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ADNPQ9H2P0 1102 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ABT1Q9ULW3 272 aaKnown RBP11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 MED16Q9Y2X0 877 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 TBKBP1A7MCY6 615 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 E2F3O00716 465 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 SCAMP3O14828 347 aaKnown RBP11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 COL6A1P12109 1028 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ITGALP20701 1170 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ALDH7A1P49419 539 aaKnown RBP11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ADARP55265 1226 aaKnown RBP11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ERVPABLB-1P60509 514 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 RPL38P63173 70 aaKnown RBP11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 HPCAP84074 193 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 MRPL58Q14197 206 aaKnown RBP11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 NEDD8Q15843 81 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ZIK1Q3SY52 487 aaPredicted RBP11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 CACHD1Q5VU97 1274 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 CYP20A1Q6UW02 462 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 LEMD2Q8NC56 503 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 FAM126AQ9BYI3 521 aaPredicted RBP11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 CXorf21Q9HAI6 301 aa11.55□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 FFAR2O15552 330 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 RGS14O43566 566 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 TULP3O75386 442 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 IGHA2P01877 340 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ANXA6P08133 673 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 GATMP50440 423 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 CREB5Q02930 508 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 EMX2Q04743 252 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 VEPH1Q14D04 833 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 SLC36A3Q495N2 470 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 XKR7Q5GH72 579 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 TMEM214Q6NUQ4 689 aaKnown RBP11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 LETMD1Q6P1Q0 360 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 FAM151BQ6UXP7 276 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ZFAND4Q86XD8 727 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 PTRH1Q86Y79 214 aaKnown RBP11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ZDHHC13Q8IUH4 622 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 DBF4BQ8NFT6 615 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 PROKR1Q8TCW9 393 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 SKA2Q8WVK7 121 aaPredicted RBP11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 LINC01599Q8WXQ3 324 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ZBED2Q9BTP6 218 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 C1QTNF3Q9BXJ4 246 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 TM6SF2Q9BZW4 377 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 DPY30Q9C005 99 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 OCEL1Q9H607 264 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 ASB8Q9H765 288 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 OPTCQ9UBM4 332 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 CRLS1Q9UJA2 301 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 MYLKQ15746 1914 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 MYO16Q9Y6X6 1858 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 FFAR3O14843 346 aa11.54□□□□□ -0.56
CSPG4P3Y-201ENST00000418188 GPR42O15529 346 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms