RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 C11orf96Q7Z7L8 435 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 SDCCAG8Q86SQ7 713 aaPredicted RBP14.45□□□□□ -0.1
CHD1-202ENST00000414220 SFTPA2Q8IWL1 248 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 KLHL7Q8IXQ5 586 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 OTUD6BQ8N6M0 293 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 OR13J1Q8NGT2 312 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 WDR36Q8NI36 951 aaKnown RBP14.45□□□□□ -0.1
CHD1-202ENST00000414220 HM13Q8TCT9 377 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 SLCO2A1Q92959 643 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 TMEM159Q96B96 161 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 SGSM3Q96HU1 749 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 CHRAC1Q9NRG0 131 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 RABGEF1Q9UJ41 708 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 IGLV3-16A0A075B6K0 115 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 CCDC187A0A096LP49 1063 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 A0A1W2PQM1 296 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 A6NCN8 305 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 B4GAT1O43505 415 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 RBMS1P29558 406 aaKnown RBP14.44□□□□□ -0.1
CHD1-202ENST00000414220 TTPAP49638 278 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 ARSDP51689 593 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 DR1Q01658 176 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 PLOD1Q02809 727 aaPredicted RBP14.44□□□□□ -0.1
CHD1-202ENST00000414220 PTK6Q13882 451 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 KRT33BQ14525 404 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 RTP5Q14D33 572 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.44□□□□□ -0.1
CHD1-202ENST00000414220 METRNLQ641Q3 311 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 MRNIPQ6NTE8 343 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 CFAP206Q8IYR0 622 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 KDF1Q8NAX2 398 aaPredicted RBP14.44□□□□□ -0.1
CHD1-202ENST00000414220 GABPB2Q8TAK5 448 aaPredicted RBP14.44□□□□□ -0.1
CHD1-202ENST00000414220 ZCCHC14Q8WYQ9 949 aaKnown RBP14.44□□□□□ -0.1
CHD1-202ENST00000414220 CPT1BQ92523 772 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 KIFC1Q9BW19 673 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 UCK1Q9HA47 277 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 EPB41L5Q9HCM4 733 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 CATSPERZQ9NTU4 200 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 DKK4Q9UBT3 224 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 SOX13Q9UN79 622 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 HEBP2Q9Y5Z4 205 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 COLEC10Q9Y6Z7 277 aa14.44□□□□□ -0.1
CHD1-202ENST00000414220 IGHV1OR21-1A0A087WYE8 117 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 TCRBV7S3A2A0A539 114 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 IFRD1O00458 451 aaPredicted RBP14.43□□□□□ -0.1
CHD1-202ENST00000414220 CD3EAPO15446 510 aaKnown RBP14.43□□□□□ -0.1
CHD1-202ENST00000414220 EML2O95834 649 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 TUBB4AP04350 444 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 AMD1P17707 334 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 CCKBRP32239 447 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 FOXN2P32314 431 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 LSSP48449 732 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 CDKN1CP49918 316 aaPredicted RBP14.43□□□□□ -0.1
CHD1-202ENST00000414220 DRG2P55039 364 aaKnown RBP14.43□□□□□ -0.1
CHD1-202ENST00000414220 CYP4F3Q08477 520 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 SQSTM1Q13501 440 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 TRA2AQ13595 282 aaKnown RBP eCLIP14.43□□□□□ -0.1
CHD1-202ENST00000414220 DHX34Q14147 1143 aaKnown RBP14.43□□□□□ -0.1
CHD1-202ENST00000414220 NFE2L1Q14494 772 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 DBN1Q16643 649 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 PHF19Q5T6S3 580 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 KLHL35Q6PF15 583 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 PACS1Q6VY07 963 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 SYT10Q6XYQ8 523 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 USP53Q70EK8 1073 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 HOOK3Q86VS8 718 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 MARCH9Q86YJ5 346 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 MPP5Q8N3R9 675 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 ATXN7L3BQ96GX2 97 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 CMKLR1Q99788 373 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 POLR1BQ9H9Y6 1135 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 SYBUQ9NX95 663 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 FAM8A1Q9UBU6 413 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 SLC2A6Q9UGQ3 507 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 VPS9D1Q9Y2B5 631 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 NEU2Q9Y3R4 380 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 ENTPD2Q9Y5L3 495 aa14.43□□□□□ -0.1
CHD1-202ENST00000414220 OR51F1A6NGY5 319 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 LILRA5A6NI73 299 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 GOLGA8MH3BSY2 632 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 DNALI1O14645 258 aaPredicted RBP14.42□□□□□ -0.1
CHD1-202ENST00000414220 NDUFS3O75489 264 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 POLBP06746 335 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 NDUFS1P28331 727 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 CD1CP29017 333 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 CA5AP35218 305 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 SLC19A1P41440 591 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 MLLT3P42568 568 aaPredicted RBP14.42□□□□□ -0.1
CHD1-202ENST00000414220 MAPK9P45984 424 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 UBE2IP63279 158 aaKnown RBP14.42□□□□□ -0.1
CHD1-202ENST00000414220 GABREP78334 506 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 CRADDP78560 199 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 RPA4Q13156 261 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 ST3GAL2Q16842 350 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 DNAJC21Q5F1R6 531 aaKnown RBP14.42□□□□□ -0.1
CHD1-202ENST00000414220 C3orf38Q5JPI3 329 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 RNF187Q5TA31 235 aaPredicted RBP14.42□□□□□ -0.1
CHD1-202ENST00000414220 TMEM71Q6P5X7 295 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 FOXR1Q6PIV2 292 aa14.42□□□□□ -0.1
CHD1-202ENST00000414220 TMEM26Q6ZUK4 368 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms