RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PPP2R2BQ00005 443 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 GRB14Q14449 540 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 RBBP7Q16576 425 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 ZBTB46Q86UZ6 589 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 OR13C4Q8NGS5 318 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 RBM4BQ9BQ04 359 aaKnown RBP17.43■□□□□ 0.38
SDCBP-202ENST00000413219 RBM4Q9BWF3 364 aaKnown RBP17.43■□□□□ 0.38
SDCBP-202ENST00000413219 SRCAPQ6ZRS2 3230 aa17.43■□□□□ 0.38
SDCBP-202ENST00000413219 IGLV3-10A0A075B6K4 115 aa17.42■□□□□ 0.38
SDCBP-202ENST00000413219 ARL5CA6NH57 179 aa17.42■□□□□ 0.38
SDCBP-202ENST00000413219 CDC7O00311 574 aa17.42■□□□□ 0.38
SDCBP-202ENST00000413219 HTR1BP28222 390 aa17.42■□□□□ 0.38
SDCBP-202ENST00000413219 LRRTM3Q86VH5 581 aa17.42■□□□□ 0.38
SDCBP-202ENST00000413219 OR52E4Q8NGH9 312 aa17.42■□□□□ 0.38
SDCBP-202ENST00000413219 POLR1EQ9GZS1 481 aaKnown RBP17.42■□□□□ 0.38
SDCBP-202ENST00000413219 NMUR1Q9HB89 426 aa17.42■□□□□ 0.38
SDCBP-202ENST00000413219 UBA6A0AVT1 1052 aaPredicted RBP17.41■□□□□ 0.38
SDCBP-202ENST00000413219 C17orf102A2RUQ5 167 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 CNOT3O75175 753 aaKnown RBP17.41■□□□□ 0.38
SDCBP-202ENST00000413219 PAX3P23760 479 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 AGTR2P50052 363 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 SCNN1GP51170 649 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 IL18R1Q13478 541 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 SELPLGQ14242 412 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 PTPRCAPQ14761 206 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 SCIMPQ6UWF3 145 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 Q6ZSR9 355 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 NECAB2Q7Z6G3 386 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 OR10T2Q8NGX3 314 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 GIPC2Q8TF65 315 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 SGCDQ92629 289 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 CDCA5Q96FF9 252 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 CDKN2AIPNLQ96HQ2 116 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 PPM1MQ96MI6 270 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 ZNF583Q96ND8 569 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 ACOX2Q99424 681 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 SEMA3CQ99985 751 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 PAAF1Q9BRP4 392 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 AMBRA1Q9C0C7 1298 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 NLE1Q9NVX2 485 aaPredicted RBP17.41■□□□□ 0.38
SDCBP-202ENST00000413219 TRIM17Q9Y577 477 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 PCDHGB1Q9Y5G3 927 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 MAGED1Q9Y5V3 778 aaPredicted RBP17.41■□□□□ 0.38
SDCBP-202ENST00000413219 A0A1W2PQH9 124 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 FAM92AA1XBS5 289 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 NPEPPSL1A6NEC2 478 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 MOXD2PA6NHM9 499 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 ZBTB7AO95365 584 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 CCDC159P0C7I6 412 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 CD9P21926 228 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 PCMT1P22061 227 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 NFKBIAP25963 317 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 GJA5P36382 358 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 RXRGP48443 463 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 TMED10P49755 219 aaKnown RBP17.41■□□□□ 0.38
SDCBP-202ENST00000413219 MTPNP58546 118 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 TSPY1Q01534 308 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 CD47Q08722 323 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 CTF1Q16619 201 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 MEP1AQ16819 746 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 IMPG1Q17R60 797 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 UGT3A1Q6NUS8 523 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 AFTPHQ6ULP2 937 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 NEK10Q6ZWH5 1172 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 GPR142Q7Z601 462 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 GALNT13Q8IUC8 556 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 ZNF566Q969W8 418 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 NODALQ96S42 347 aa17.41■□□□□ 0.38
SDCBP-202ENST00000413219 M0QZQ0 153 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 BTN3A1O00481 513 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 PCNAP12004 261 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 HOXB6P17509 224 aaKnown RBP17.4■□□□□ 0.38
SDCBP-202ENST00000413219 FMO4P31512 558 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 RAD23AP54725 363 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 ACOX1Q15067 660 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 DPY19L1Q2PZI1 675 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 CTU2Q2VPK5 515 aaKnown RBP17.4■□□□□ 0.38
SDCBP-202ENST00000413219 PARP15Q460N3 678 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 ALFQ53S48 1182 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 MS4A13Q5J8X5 152 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 FAM126BQ8IXS8 530 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 THEM5Q8N1Q8 247 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 CHCHD4Q8N4Q1 142 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 SMURF2Q9HAU4 748 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 GALPQ9UBC7 116 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 C3orf18Q9UK00 162 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 NUDT5Q9UKK9 219 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 FAM50BQ9Y247 325 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 VPS9D1Q9Y2B5 631 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 TMEM247A6NEH6 219 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 ZNF99A8MXY4 864 aaPredicted RBP17.4■□□□□ 0.38
SDCBP-202ENST00000413219 SLC1A7O00341 560 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 E2F3O00716 465 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 ANKRD28O15084 1053 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 SLC22A1O15245 554 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 NDUFS2O75306 463 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 OR4F21O95013 312 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 GABARAPO95166 117 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 CST1P01037 141 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 RYKP34925 604 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms