RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 MTM1Q13496 603 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SEPT6Q14141 434 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 FGL2Q14314 439 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RFTN1Q14699 578 aaPredicted RBP9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 LBRQ14739 615 aaKnown RBP9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CRYMQ14894 314 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ZNF284Q2VY69 593 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MPP7Q5T2T1 576 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 AGBL4Q5VU57 503 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CXorf57Q6NSI4 855 aaKnown RBP9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CAPN12Q6ZSI9 719 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ASB18Q6ZVZ8 466 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MARK2Q7KZI7 788 aaKnown RBP9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TIPARPQ7Z3E1 657 aaKnown RBP9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ABI3BPQ7Z7G0 1075 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SLC26A11Q86WA9 606 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 LRRC6Q86X45 466 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MMP21Q8N119 569 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SLC34A3Q8N130 599 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 NSMCE1Q8WV22 266 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CCDC74AQ96AQ1 378 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 FAM131CQ96AQ9 280 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CFAP36Q96G28 342 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 LMLNQ96KR4 655 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MRGPRX2Q96LB1 330 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 BMFQ96LC9 184 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TBL1YQ9BQ87 522 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 KIFC1Q9BW19 673 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TCEAL2Q9H3H9 227 aaPredicted RBP9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SP110Q9HB58 689 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MRM3Q9HC36 420 aaKnown RBP9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 HAUS2Q9NVX0 235 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SYBUQ9NX95 663 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SOX13Q9UN79 622 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MAD1L1Q9Y6D9 718 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 FAM169AQ9Y6X4 670 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 NAV3Q8IVL0 2385 aa9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RP1L1Q8IWN7 2480 aaPredicted RBP9.46□□□□□ -0.9
SOX9-AS1-201ENST00000412640 IQANK1A0A1B0GTG1 560 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ZCWPW2A0A1B0GU75 182 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 POM121BA6NF01 834 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 F5H423 210 aaPredicted RBP9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SLC7A4O43246 635 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 EPOP01588 193 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RHOCP08134 193 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MMP2P08253 660 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 INHBAP08476 426 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 BRAFP15056 766 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CES1P23141 567 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CNTFP26441 200 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 LSP1P33241 339 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 STK19P49842 368 aaPredicted RBP9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SERPINB9P50453 376 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ARSDP51689 593 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SESN2P58004 480 aaPredicted RBP9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 GNGT1P63211 74 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 GUCY1A3Q02108 690 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 NIPAL4Q0D2K0 466 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CDC20Q12834 499 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SPARCL1Q14515 664 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ELAVL3Q14576 367 aaKnown RBP9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 EFTUD2Q15029 972 aaKnown RBP eCLIP9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TMED2Q15363 201 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TMEM164Q5U3C3 297 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TRMT10BQ6PF06 316 aaKnown RBP9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SH2D5Q6ZV89 423 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MCEMP1Q8IX19 187 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RBFAQ8N0V3 343 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CFAP52Q8N1V2 620 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 HJURPQ8NCD3 748 aaPredicted RBP9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 OR52K2Q8NGK3 314 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SPATA22Q8NHS9 363 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ARRDC2Q8TBH0 407 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ALKBH8Q96BT7 664 aaKnown RBP9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MTBPQ96DY7 904 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PSKH2Q96QS6 385 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RANBP9Q96S59 729 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CMKLR1Q99788 373 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 LRRN3Q9H3W5 708 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SMYD2Q9NRG4 433 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SIRPGQ9P1W8 387 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TBK1Q9UHD2 729 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 GGT7Q9UJ14 662 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PPM1HQ9ULR3 514 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 OR51B4Q9Y5P0 310 aa9.45□□□□□ -0.9
SOX9-AS1-201ENST00000412640 A0A0D9SEW6 157 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SPTY2D1-AS1A0A0U1RR47 76 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 LOC285095A0A1B0GVY8 99 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TMEM120BA0PK00 339 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CXorf49A8MYA2 514 aaPredicted RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TCP11X1B4DZS4 312 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 YY2O15391 372 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TYROBPO43914 113 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ZMPSTE24O75844 475 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 LUC7L3O95232 432 aaKnown RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MT-CYBP00156 380 aaPredicted RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ANXA6P08133 673 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SRPRAP08240 638 aaKnown RBP9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PYGBP11216 843 aa9.44□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CCL4P13236 92 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms