RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 CCHCR1Q8TD31 782 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 CLIP3Q96DZ5 547 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 LURAP1Q96LR2 239 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 FER1L6-AS2Q96M78 137 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 DPH2Q9BQC3 489 aaPredicted RBP5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 TIMM29Q9BSF4 260 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 MLPHQ9BV36 600 aaPredicted RBP5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 SNRNP25Q9BV90 132 aaKnown RBP5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 PRR14Q9BWN1 585 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 POLR1EQ9GZS1 481 aaKnown RBP5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 OR2AG1Q9H205 316 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 CHST8Q9H2A9 424 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 FANCEQ9HB96 536 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 TRIM39Q9HCM9 518 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 LATS2Q9NRM7 1088 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 SEPT11Q9NVA2 429 aaKnown RBP5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 SCHIP1Q9P0W5 487 aaPredicted RBP5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 ATXN10Q9UBB4 475 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 COPG2Q9UBF2 871 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 CNOT6Q9ULM6 557 aaKnown RBP5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 RPL26L1Q9UNX3 145 aaKnown RBP5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 OSGIN2Q9Y236 505 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 PADI2Q9Y2J8 665 aa5.88□□□□□ -1.47
HMGN1P20-201ENST00000411849 PKDREJQ9NTG1 2253 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 UBA6A0AVT1 1052 aaPredicted RBP5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 OR52A4PA6NMU1 304 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 C9J4A7 227 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 H3BRJ5 948 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 MEN1O00255 615 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 PEX12O00623 359 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 VEGFDO43915 354 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 MAFKO60675 156 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 CLDN7O95471 211 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 ZBTB11O95625 1053 aaPredicted RBP5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 EDN3P14138 238 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 ZNF8P17098 575 aaPredicted RBP5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 FECHP22830 423 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 PSMA2P25787 234 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 RPL10P27635 214 aaKnown RBP5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 SERPINB6P35237 376 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 ARL4AP40617 200 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 HADHAP40939 763 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 GLRBP48167 497 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 DRG2P55039 364 aaKnown RBP5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 POLR2FP61218 127 aaKnown RBP5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 ART3Q13508 389 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 MYBPC3Q14896 1274 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 PLCL1Q15111 1095 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 LLGL1Q15334 1064 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 GPR19Q15760 415 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 PLA2G4EQ3MJ16 856 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 ANKRD20A8PQ5CZ79 823 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 CRB2Q5IJ48 1285 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 PLEKHS1Q5SXH7 462 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 LCE2CQ5TA81 110 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 PDPK2PQ6A1A2 396 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 ARMC6Q6NXE6 501 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 PPP1R2P3Q6NXS1 205 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 CRTC3Q6UUV7 619 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 SASS6Q6UVJ0 657 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 Q6ZS92 163 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 KCNMB4Q86W47 210 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 LRRC49Q8IUZ0 686 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 GALNT16Q8N428 558 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 ZBTB2Q8N680 514 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 SLC38A9Q8NBW4 561 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 COG1Q8WTW3 980 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 ZNF501Q96CX3 271 aaPredicted RBP5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 LYSMD1Q96S90 227 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 KCTD15Q96SI1 283 aaPredicted RBP5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 PCDHB18PQ96TA0 734 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 MAP3K3Q99759 626 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 ZSCAN5AQ9BUG6 496 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 SPATA16Q9BXB7 569 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 NT5MQ9NPB1 228 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 CHST11Q9NPF2 352 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 RAD18Q9NS91 495 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 SAMSN1Q9NSI8 373 aaKnown RBP5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 ANO10Q9NW15 660 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 SOHLH2Q9NX45 425 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 CWC15Q9P013 229 aaKnown RBP5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 PCSK1NQ9UHG2 260 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 DNAJC16Q9Y2G8 782 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 NTNG1Q9Y2I2 539 aa5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 KLF2Q9Y5W3 355 aaPredicted RBP5.87□□□□□ -1.47
HMGN1P20-201ENST00000411849 HIVEP1P15822 2718 aa5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 CACNA1CQ13936 2221 aa5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 OR5K3A6NET4 321 aa5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 FAM187AA6NFU0 413 aa5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 KCNJ13O60928 360 aa5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 STSP08842 583 aa5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 CD63P08962 238 aa5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 HBQ1P09105 142 aa5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 ATP1A3P13637 1013 aa5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 COX6B1P14854 86 aa5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 BRAFP15056 766 aa5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 AGXTP21549 392 aa5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 EEF1GP26641 437 aaKnown RBP5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 OTX2P32243 289 aa5.86□□□□□ -1.47
HMGN1P20-201ENST00000411849 RORAP35398 523 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms