RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 PLCD1P51178 756 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 BMXP51813 675 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 ECT2LQ008S8 904 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 ROR2Q01974 943 aaKnown RBP5.08□□□□□ -1.6
LSM5-206ENST00000409987 SPOCK1Q08629 439 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 SREBF2Q12772 1141 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 GRIK2Q13002 908 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 RPA4Q13156 261 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 CBX3Q13185 183 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 KCNC3Q14003 757 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 DLG2Q15700 870 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 LETM2Q2VYF4 491 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 TYW3Q6IPR3 259 aaKnown RBP5.08□□□□□ -1.6
LSM5-206ENST00000409987 PI4KAP1Q8N8J0 262 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 TC2NQ8N9U0 490 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 MCUQ8NE86 351 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 OIT3Q8WWZ8 545 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 SEPT1Q8WYJ6 367 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 APBB2Q92870 758 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 RHBDF1Q96CC6 855 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 HDAC11Q96DB2 347 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 TXNDC15Q96J42 360 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 ZNF778Q96MU6 729 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 RUNDC3BQ96NL0 473 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 IWS1Q96ST2 819 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 MLPHQ9BV36 600 aaPredicted RBP5.08□□□□□ -1.6
LSM5-206ENST00000409987 FAM234AQ9H0X4 552 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 EPB41L5Q9HCM4 733 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 ACSL5Q9ULC5 683 aa5.08□□□□□ -1.6
LSM5-206ENST00000409987 H3BNX3 289 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 PGRMC2O15173 223 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 TADA2AO75478 443 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 KCNK5O95279 499 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 SIX3O95343 332 aaPredicted RBP5.07□□□□□ -1.6
LSM5-206ENST00000409987 EGFP01133 1207 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 LMO1P25800 156 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 STX2P32856 288 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 AMTP48728 403 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 RAB28P51157 221 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 CAPZA1P52907 286 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 SLC12A3P55017 1021 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 UBASH3AP57075 661 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 YBEYP58557 167 aaPredicted RBP5.07□□□□□ -1.6
LSM5-206ENST00000409987 POLR2FP61218 127 aaKnown RBP5.07□□□□□ -1.6
LSM5-206ENST00000409987 TUBB4BP68371 445 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 GRSF1Q12849 480 aaKnown RBP eCLIP5.07□□□□□ -1.6
LSM5-206ENST00000409987 ITGA7Q13683 1181 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 TWIST1Q15672 202 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 IGSF11Q5DX21 431 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 PAPPA-AS1Q5QFB9 102 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 FAM69BQ5VUD6 431 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 SLC36A4Q6YBV0 504 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 ADCK2Q7Z695 626 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 ARID3BQ8IVW6 561 aaPredicted RBP5.07□□□□□ -1.6
LSM5-206ENST00000409987 SYCP3Q8IZU3 236 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 BEST3Q8N1M1 668 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 PRR26Q8N8Z3 221 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 IQUBQ8NA54 791 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 OR2AK2Q8NG84 335 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 NSMCE1Q8WV22 266 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 ASB5Q8WWX0 329 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 ADAMTS14Q8WXS8 1223 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 N4BP2L2Q92802 583 aaPredicted RBP5.07□□□□□ -1.6
LSM5-206ENST00000409987 CORO2AQ92828 525 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 PTERQ96BW5 349 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 PDLIM5Q96HC4 596 aaKnown RBP5.07□□□□□ -1.6
LSM5-206ENST00000409987 ERO1AQ96HE7 468 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 FERMT1Q9BQL6 677 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 MGME1Q9BQP7 344 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 SPXQ9BT56 116 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 NUP85Q9BW27 656 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 DCLK3Q9C098 648 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 C1orf21Q9H246 121 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 MAGIXQ9H6Y5 334 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 MRPL44Q9H9J2 332 aaKnown RBP5.07□□□□□ -1.6
LSM5-206ENST00000409987 ABCB8Q9NUT2 735 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 CHCHD3Q9NX63 227 aaKnown RBP5.07□□□□□ -1.6
LSM5-206ENST00000409987 SH3BGRL2Q9UJC5 107 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 RABL2BQ9UNT1 228 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 SQORQ9Y6N5 450 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 SCRIBQ14160 1630 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 NCAPD3P42695 1498 aa5.07□□□□□ -1.6
LSM5-206ENST00000409987 SPAG9O60271 1321 aaKnown RBP5.06□□□□□ -1.6
LSM5-206ENST00000409987 NESP48681 1621 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 KANSL1LA0AUZ9 987 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 LNP1A1A4G5 178 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 CPED1A4D0V7 1026 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 OR6C75A6NL08 312 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 SOCS6O14544 535 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 MAP2K7O14733 419 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 SMAD9O15198 467 aaKnown RBP5.06□□□□□ -1.6
LSM5-206ENST00000409987 TXNL1O43396 289 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 PLRG1O43660 514 aaKnown RBP5.06□□□□□ -1.6
LSM5-206ENST00000409987 PRPSAP2O60256 369 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 DDNO94850 711 aaPredicted RBP5.06□□□□□ -1.6
LSM5-206ENST00000409987 GCNT3O95395 438 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 CH25HO95992 272 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 TPM2P07951 284 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 SRCP12931 536 aa5.06□□□□□ -1.6
LSM5-206ENST00000409987 IL10P22301 178 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms