RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 FAM182AQ5T1J6 154 aa16.54■□□□□ 0.24
SCRN1-203ENST00000409570 IZUMO3Q5VZ72 239 aa16.54■□□□□ 0.24
SCRN1-203ENST00000409570 KMT5CQ86Y97 462 aa16.54■□□□□ 0.24
SCRN1-203ENST00000409570 TICAM1Q8IUC6 712 aa16.54■□□□□ 0.24
SCRN1-203ENST00000409570 D2HGDHQ8N465 521 aa16.54■□□□□ 0.24
SCRN1-203ENST00000409570 CNTD1Q8N815 330 aa16.54■□□□□ 0.24
SCRN1-203ENST00000409570 SLC38A9Q8NBW4 561 aa16.54■□□□□ 0.24
SCRN1-203ENST00000409570 CHST8Q9H2A9 424 aa16.54■□□□□ 0.24
SCRN1-203ENST00000409570 RAD18Q9NS91 495 aa16.54■□□□□ 0.24
SCRN1-203ENST00000409570 IP6K2Q9UHH9 426 aa16.54■□□□□ 0.24
SCRN1-203ENST00000409570 ZNF711Q9Y462 761 aa16.54■□□□□ 0.24
SCRN1-203ENST00000409570 ZGRF1Q86YA3 2104 aa16.54■□□□□ 0.24
SCRN1-203ENST00000409570 SMTNL1A8MU46 457 aa16.53■□□□□ 0.24
SCRN1-203ENST00000409570 SCRG1O75711 98 aa16.53■□□□□ 0.24
SCRN1-203ENST00000409570 SLC4A1P02730 911 aa16.53■□□□□ 0.24
SCRN1-203ENST00000409570 BPIP17213 487 aa16.53■□□□□ 0.24
SCRN1-203ENST00000409570 VARSP26640 1264 aaKnown RBP16.53■□□□□ 0.24
SCRN1-203ENST00000409570 LCN10Q6JVE6 187 aa16.53■□□□□ 0.24
SCRN1-203ENST00000409570 PNPLA2Q96AD5 504 aa16.53■□□□□ 0.24
SCRN1-203ENST00000409570 HDAC11Q96DB2 347 aa16.53■□□□□ 0.24
SCRN1-203ENST00000409570 C19orf60Q96EN9 201 aa16.53■□□□□ 0.24
SCRN1-203ENST00000409570 MAGEE1Q9HCI5 957 aa16.53■□□□□ 0.24
SCRN1-203ENST00000409570 MAP10Q9P2G4 905 aa16.53■□□□□ 0.24
SCRN1-203ENST00000409570 ANAPC7Q9UJX3 599 aa16.53■□□□□ 0.24
SCRN1-203ENST00000409570 ANKRD17O75179 2603 aaKnown RBP16.53■□□□□ 0.24
SCRN1-203ENST00000409570 SVILO95425 2214 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 SSU72P8A0A1W2PR75 194 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 TLCD2A6NGC4 264 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 KCNK1O00180 336 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 ZNF185O15231 689 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 TMEM63AO94886 807 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 VCLP18206 1134 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 HALP42357 657 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 TUBB4BP68371 445 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 HSD11B2P80365 405 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 TMEM115Q12893 351 aaPredicted RBP16.52■□□□□ 0.24
SCRN1-203ENST00000409570 ZBTB17Q13105 803 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 TUBB2AQ13885 445 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 GPR19Q15760 415 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 RPE65Q16518 533 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 FAM69BQ5VUD6 431 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 KLHL35Q6PF15 583 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 CPNE8Q86YQ8 564 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 HPS6Q86YV9 775 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 TRAPPC5Q8IUR0 188 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 TMEM126BQ8IUX1 230 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 RHOT1Q8IXI2 618 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 PQLC3Q8N755 202 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 ENDOVQ8N8Q3 282 aaKnown RBP16.52■□□□□ 0.24
SCRN1-203ENST00000409570 FAF2Q96CS3 445 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 ZNF501Q96CX3 271 aaPredicted RBP16.52■□□□□ 0.24
SCRN1-203ENST00000409570 VPS35Q96QK1 796 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 CD180Q99467 661 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 ZNF670Q9BS34 389 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 TUBB2BQ9BVA1 445 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 GPR63Q9BZJ6 419 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 THAP2Q9H0W7 228 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.24
SCRN1-203ENST00000409570 KCND1Q9NSA2 647 aa16.52■□□□□ 0.24
SCRN1-203ENST00000409570 CNTRLQ7Z7A1 2325 aa16.52■□□□□ 0.23
SCRN1-203ENST00000409570 CROCCQ5TZA2 2017 aa16.52■□□□□ 0.23
SCRN1-203ENST00000409570 DOCK10Q96BY6 2186 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 OR5K3A6NET4 321 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 KRT86O43790 486 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 RAB40ALP0C0E4 278 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 MX2P20592 715 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 GJC1P36383 396 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 SSR1P43307 286 aaKnown RBP16.51■□□□□ 0.23
SCRN1-203ENST00000409570 ARL4DP49703 201 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 ITGA1P56199 1179 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 DMPKQ09013 629 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 NR6A1Q15406 480 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 HADHQ16836 314 aaKnown RBP16.51■□□□□ 0.23
SCRN1-203ENST00000409570 ANO6Q4KMQ2 910 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 DNTTIP2Q5QJE6 756 aaKnown RBP16.51■□□□□ 0.23
SCRN1-203ENST00000409570 PLEKHS1Q5SXH7 462 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 PRAMEF17Q5VTA0 474 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 GLIS1Q8NBF1 620 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 CCNYQ8ND76 341 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 SNRNP40Q96DI7 357 aaKnown RBP16.51■□□□□ 0.23
SCRN1-203ENST00000409570 LRFN5Q96NI6 719 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 SMAD5Q99717 465 aaKnown RBP16.51■□□□□ 0.23
SCRN1-203ENST00000409570 SNX7Q9UNH6 387 aa16.51■□□□□ 0.23
SCRN1-203ENST00000409570 UBA6A0AVT1 1052 aaPredicted RBP16.5■□□□□ 0.23
SCRN1-203ENST00000409570 A6NL46 340 aa16.5■□□□□ 0.23
SCRN1-203ENST00000409570 AURKAO14965 403 aa16.5■□□□□ 0.23
SCRN1-203ENST00000409570 KCNJ13O60928 360 aa16.5■□□□□ 0.23
SCRN1-203ENST00000409570 CBX6O95503 412 aa16.5■□□□□ 0.23
SCRN1-203ENST00000409570 KLK3P07288 261 aaPredicted RBP16.5■□□□□ 0.23
SCRN1-203ENST00000409570 IFI35P80217 286 aaPredicted RBP16.5■□□□□ 0.23
SCRN1-203ENST00000409570 PPIDQ08752 370 aaKnown RBP16.5■□□□□ 0.23
SCRN1-203ENST00000409570 GTF2H3Q13889 308 aa16.5■□□□□ 0.23
SCRN1-203ENST00000409570 PLCL1Q15111 1095 aa16.5■□□□□ 0.23
SCRN1-203ENST00000409570 ATP13A5Q4VNC0 1218 aa16.5■□□□□ 0.23
SCRN1-203ENST00000409570 FAM83HQ6ZRV2 1179 aaPredicted RBP16.5■□□□□ 0.23
SCRN1-203ENST00000409570 DSELQ8IZU8 1212 aa16.5■□□□□ 0.23
SCRN1-203ENST00000409570 ZBTB2Q8N680 514 aa16.5■□□□□ 0.23
SCRN1-203ENST00000409570 KCTD6Q8NC69 237 aa16.5■□□□□ 0.23
SCRN1-203ENST00000409570 OR8K5Q8NH50 307 aa16.5■□□□□ 0.23
SCRN1-203ENST00000409570 IMP4Q96G21 291 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms