RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.41■□□□□ 0.86
USP39-203ENST00000409470 WFIKKN2Q8TEU8 576 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 SPATA16Q9BXB7 569 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 GUCA1CO95843 209 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 ASLP04424 464 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 SRPRAP08240 638 aaKnown RBP20.41■□□□□ 0.86
USP39-203ENST00000409470 UROSP10746 265 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 NFKBIAP25963 317 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 ARL1P40616 181 aaPredicted RBP20.41■□□□□ 0.86
USP39-203ENST00000409470 ATP4BP51164 291 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 CCNG1P51959 295 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 ST8SIA6P61647 398 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 AP2B1P63010 937 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 PTK2BQ14289 1009 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 C12orf40Q86WS4 652 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 PGAM4Q8N0Y7 254 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 HMGCLL1Q8TB92 370 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 CDRT15Q96T59 188 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 NUSAP1Q9BXS6 441 aaKnown RBP20.41■□□□□ 0.86
USP39-203ENST00000409470 WDR41Q9HAD4 459 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 KCTD5Q9NXV2 234 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 GIMAP2Q9UG22 337 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 ADAMTS6Q9UKP5 1117 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 POMPQ9Y244 141 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 OARD1Q9Y530 152 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 UPK3BL1B0FP48 263 aa20.4■□□□□ 0.86
USP39-203ENST00000409470 UPK3BL2E5RIL1 263 aa20.4■□□□□ 0.86
USP39-203ENST00000409470 HOXC11O43248 304 aaPredicted RBP20.4■□□□□ 0.86
USP39-203ENST00000409470 VPS4BO75351 444 aa20.4■□□□□ 0.86
USP39-203ENST00000409470 ALDOCP09972 364 aaKnown RBP20.4■□□□□ 0.86
USP39-203ENST00000409470 C18orf21Q32NC0 220 aaPredicted RBP20.4■□□□□ 0.86
USP39-203ENST00000409470 ZNF366Q8N895 744 aa20.4■□□□□ 0.86
USP39-203ENST00000409470 SNX31Q8N9S9 440 aa20.4■□□□□ 0.86
USP39-203ENST00000409470 EGFL8Q99944 293 aa20.4■□□□□ 0.86
USP39-203ENST00000409470 PCDH12Q9NPG4 1184 aa20.4■□□□□ 0.86
USP39-203ENST00000409470 LATS2Q9NRM7 1088 aa20.4■□□□□ 0.86
USP39-203ENST00000409470 POLG2Q9UHN1 485 aa20.4■□□□□ 0.86
USP39-203ENST00000409470 TULP3O75386 442 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 CTSLP07711 333 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 SNRPB2P08579 225 aaKnown RBP20.39■□□□□ 0.86
USP39-203ENST00000409470 OR56A5P0C7T3 313 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 TIMP2P16035 220 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 LBPP18428 481 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 B4GALNT1Q00973 533 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 GRB7Q14451 532 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 PCBP2Q15366 365 aaKnown RBP eCLIP20.39■□□□□ 0.86
USP39-203ENST00000409470 POM121L1PQ3SYA9 428 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 FAM78AQ5JUQ0 283 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 PDPRQ8NCN5 879 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 BPIFB1Q8TDL5 484 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 ZFYVE19Q96K21 471 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 ZNF382Q96SR6 550 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 NOL11Q9H8H0 719 aaKnown RBP20.39■□□□□ 0.86
USP39-203ENST00000409470 ZNF225Q9UK10 706 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 PACSIN3Q9UKS6 424 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 ANGPTL2Q9UKU9 493 aa20.39■□□□□ 0.86
USP39-203ENST00000409470 NUP210Q8TEM1 1887 aaPredicted RBP20.39■□□□□ 0.86
USP39-203ENST00000409470 PIKFYVEQ9Y2I7 2098 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 FKBP6O75344 327 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 OR4F21O95013 312 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 HGFP14210 728 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 AKT1P31749 480 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 PKNOX1P55347 436 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 CDC16Q13042 620 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 CRY1Q16526 586 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 ZNF805Q5CZA5 627 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 PAOXQ6QHF9 649 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 DET1Q7L5Y6 550 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 HSD11B1LQ7Z5J1 315 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 FAM83DQ9H4H8 585 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 EBF3Q9H4W6 596 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 NSUN3Q9H649 340 aaKnown RBP20.39■□□□□ 0.85
USP39-203ENST00000409470 PFDN4Q9NQP4 134 aa20.39■□□□□ 0.85
USP39-203ENST00000409470 CHD9Q3L8U1 2897 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 IGLV3-16A0A075B6K0 115 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 TSPAN11A1L157 253 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 VCLP18206 1134 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 DUSP6Q16828 381 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 GOLGA7Q7Z5G4 137 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 PHYKPLQ8IUZ5 450 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 NPAS3Q8IXF0 933 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 KIAA1958Q8N8K9 716 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 CDYL2Q8N8U2 506 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 DCBLD1Q8N8Z6 715 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 OR52B6Q8NGF0 335 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 OR9I1Q8NGQ6 314 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 JADE3Q92613 823 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 ATP6V1E2Q96A05 226 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 DCUN1D1Q96GG9 259 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 LRIG1Q96JA1 1093 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 CDK15Q96Q40 435 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 SLC25A23Q9BV35 468 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 SFXN1Q9H9B4 322 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 YBX2Q9Y2T7 364 aaKnown RBP20.38■□□□□ 0.85
USP39-203ENST00000409470 PLXNB3Q9ULL4 1909 aa20.38■□□□□ 0.85
USP39-203ENST00000409470 NFATC1O95644 943 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 CBSLP0DN79 551 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 CBSP35520 551 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 ACADVLP49748 655 aa20.37■□□□□ 0.85
USP39-203ENST00000409470 VASPP50552 380 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms