RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TAMM41Q96BW9 452 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 SERPINB11Q96P15 392 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 BDH2Q9BUT1 245 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 POLR1EQ9GZS1 481 aaKnown RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 LHPPQ9H008 270 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 IPPKQ9H8X2 491 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 MRPL40Q9NQ50 206 aaKnown RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 ABCC13Q9NSE7 274 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 ZDHHC7Q9NXF8 308 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 RBBP6Q7Z6E9 1792 aaKnown RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 ANK1P16157 1881 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 G3V2T6 193 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 TBX1O43435 398 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 RCVRNP35243 200 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 MAGEA6P43360 314 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 CDK9P50750 372 aaKnown RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 BMXP51813 675 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 HERVK_113P63132 956 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 PLD1Q13393 1074 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 ZCCHC8Q6NZY4 707 aaKnown RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 LRRC8DQ7L1W4 858 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 HORMAD1Q86X24 394 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 LIX1Q8N485 282 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 ZNF366Q8N895 744 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 STAG3L4Q8TBR4 150 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 CENPNQ96H22 339 aaPredicted RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 OR52E6Q96RD3 313 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 FCRL5Q96RD9 977 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 ERVK-6Q9BXR3 956 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 REXO4Q9GZR2 422 aaKnown RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 RAD21L1Q9H4I0 556 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 PARVBQ9HBI1 364 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 CDH9Q9ULB4 789 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 PCDHB3Q9Y5E6 796 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 ZFP37Q9Y6Q3 630 aaPredicted RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 ATG2BQ96BY7 2078 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 LTBP3Q9NS15 1303 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 CXCL11O14625 94 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 SERPINA1P01009 418 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 THRBP10828 461 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 CCNCP24863 283 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 GTF2E2P29084 291 aaKnown RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 PRDX6P30041 224 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 CAPGP40121 348 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 NCS1P62166 190 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 TRIM60Q495X7 471 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 RFTN2Q52LD8 501 aaPredicted RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 CMPK2Q5EBM0 449 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 KCTD11Q693B1 232 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 TIGD7Q6NT04 549 aaPredicted RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 DSG4Q86SJ6 1040 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 ADGRG6Q86SQ4 1221 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 TMEM151AQ8N4L1 468 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 RTL3Q8N8U3 475 aaKnown RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 FOXJ1Q92949 421 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 CDKN2AIPNLQ96HQ2 116 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 ASB8Q9H765 288 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 VRTNQ9H8Y1 702 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 SLC38A7Q9NVC3 462 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 SUCOQ9UBS9 1254 aaKnown RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 C2orf81A6NN90 581 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 PSMD11O00231 422 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 NPHS1O60500 1241 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 DEAF1O75398 565 aaPredicted RBP8.22□□□□□ -1.09
SNX13-201ENST00000409076 MFN2O95140 757 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 SERPIND1P05546 499 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 CD1DP15813 335 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 WARSP23381 471 aaKnown RBP8.22□□□□□ -1.09
SNX13-201ENST00000409076 HNF4AP41235 474 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 TRPC1P48995 793 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 HK2P52789 917 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 IL2P60568 153 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 RPS3AP61247 264 aaKnown RBP8.22□□□□□ -1.09
SNX13-201ENST00000409076 RHOAP61586 193 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 XIAPP98170 497 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 IHHQ14623 411 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 ACAP2Q15057 778 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 RGS21Q2M5E4 152 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 SOWAHCQ53LP3 525 aaPredicted RBP8.22□□□□□ -1.09
SNX13-201ENST00000409076 RUNDC3AQ59EK9 446 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 MS4A13Q5J8X5 152 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 COLEC12Q5KU26 742 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 RNF219Q5W0B1 726 aaPredicted RBP8.22□□□□□ -1.09
SNX13-201ENST00000409076 FAM45BPQ6NSW5 357 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 GLB1LQ6UWU2 654 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 SCD5Q86SK9 330 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 GATAD2AQ86YP4 633 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 ERI1Q8IV48 349 aaKnown RBP8.22□□□□□ -1.09
SNX13-201ENST00000409076 PGBD5Q8N414 524 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 OR2T11Q8NH01 316 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 FAM45AQ8TCE6 357 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 SEPT8Q92599 483 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 SLC47A1Q96FL8 570 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 SLC2A13Q96QE2 648 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 VAT1Q99536 393 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 CIPCQ9C0C6 399 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 ARHGAP39Q9C0H5 1083 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 SH3BP4Q9P0V3 963 aa8.22□□□□□ -1.09
SNX13-201ENST00000409076 CAB39Q9Y376 341 aaPredicted RBP8.22□□□□□ -1.09
SNX13-201ENST00000409076 ARID1AO14497 2285 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms