RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 C11orf24Q96F05 449 aaPredicted RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 SP140LQ9H930 580 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 GPR25O00155 361 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 LSM1O15116 133 aaKnown RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 MSI1O43347 362 aaKnown RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 ATG13O75143 517 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 OR5F1O95221 314 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 IFNW1P05000 195 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 RPLP0P05388 317 aaKnown RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 GJA8P48165 433 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 TAS2R39P59534 338 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 SLC9B1Q4ZJI4 515 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 LCN1P1Q5VSP4 162 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 TMEM214Q6NUQ4 689 aaKnown RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 TMPRSS11BQ86T26 416 aa13.22□□□□□ -0.29
SNED1-205ENST00000405547 TTC29Q8NA56 475 aaPredicted RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 KIAA1522Q9P206 1035 aaPredicted RBP13.22□□□□□ -0.29
SNED1-205ENST00000405547 AP2A2O94973 939 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 SPATS1Q496A3 300 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 RNF44Q7L0R7 432 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 LMAN2LQ9H0V9 348 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 GLYATL1P3A0A0U1RQE8 302 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 AMHP03971 560 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 ELFN1P0C7U0 828 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 MAGP20916 626 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 THOP1P52888 689 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 LILRA4P59901 499 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 ERVK-8P63133 956 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 SLC18A2Q05940 514 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.21□□□□□ -0.29
SNED1-205ENST00000405547 IPCEF1Q8WWN9 437 aaPredicted RBP13.21□□□□□ -0.29
SNED1-205ENST00000405547 COPS4Q9BT78 406 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 ASAH2Q9NR71 780 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 TAF13Q15543 124 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 LDB1Q86U70 411 aaPredicted RBP13.21□□□□□ -0.29
SNED1-205ENST00000405547 C17orf64Q86WR6 236 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 NDRG1Q92597 394 aaKnown RBP13.21□□□□□ -0.29
SNED1-205ENST00000405547 RERGQ96A58 199 aaPredicted RBP13.21□□□□□ -0.29
SNED1-205ENST00000405547 LRRC58Q96CX6 371 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 KCNN2Q9H2S1 579 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 APOBEC3GQ9HC16 384 aaKnown RBP13.21□□□□□ -0.29
SNED1-205ENST00000405547 GMEB1Q9Y692 573 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 PER2O15055 1255 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 MSCO60682 206 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 PAOXQ6QHF9 649 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 RD3Q7Z3Z2 195 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 ZBTB2Q8N680 514 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 MED28Q9H204 178 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 HIPK3Q9H422 1215 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 PTBP2Q9UKA9 531 aaKnown RBP13.21□□□□□ -0.29
SNED1-205ENST00000405547 ASF1AQ9Y294 204 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 MAN2B2Q9Y2E5 1009 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 PCDHGB3Q9Y5G1 929 aa13.21□□□□□ -0.29
SNED1-205ENST00000405547 FAM159BA6NKW6 160 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 ZNF99A8MXY4 864 aaPredicted RBP13.21□□□□□ -0.3
SNED1-205ENST00000405547 CXCR6O00574 342 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 CAPN15O75808 1086 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 OAFQ86UD1 273 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 PEX5LQ8IYB4 626 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 MPP5Q8N3R9 675 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 CNOT6Q9ULM6 557 aaKnown RBP13.21□□□□□ -0.3
SNED1-205ENST00000405547 SLC27A5Q9Y2P5 690 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 UGT1A9O60656 530 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 DDNO94850 711 aaPredicted RBP13.21□□□□□ -0.3
SNED1-205ENST00000405547 MMP3P08254 477 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 UGT1A6P19224 532 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 UGT1A1P22309 533 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 UGT1A4P22310 534 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 UGT1A3P35503 534 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 PTGER3P43115 390 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 SMAD3P84022 425 aaKnown RBP13.21□□□□□ -0.3
SNED1-205ENST00000405547 OGFOD2Q6N063 350 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 AZIN2Q96A70 460 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 AIF1LQ9BQI0 150 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 DSN1Q9H410 356 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 UGT1A7Q9HAW7 530 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 UGT1A10Q9HAW8 530 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 UGT1A8Q9HAW9 530 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 HMGXB4Q9UGU5 601 aa13.21□□□□□ -0.3
SNED1-205ENST00000405547 ADM5C9JUS6 153 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 ZW10O43264 779 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 PSIP1O75475 530 aaKnown RBP13.2□□□□□ -0.3
SNED1-205ENST00000405547 SPAM1P38567 509 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 HSPA7P48741 367 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 PNLIPRP1P54315 467 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 KCNJ11Q14654 390 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 USP50Q70EL3 339 aaPredicted RBP13.2□□□□□ -0.3
SNED1-205ENST00000405547 PYROXD2Q8N2H3 581 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 ENDOVQ8N8Q3 282 aaKnown RBP13.2□□□□□ -0.3
SNED1-205ENST00000405547 AJAP1Q9UKB5 411 aaPredicted RBP13.2□□□□□ -0.3
SNED1-205ENST00000405547 C1QTNF3-AMACRE9PGA6 284 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 METTL18O95568 372 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 ESR1P03372 595 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 HNF4AP41235 474 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 DPY19L1Q2PZI1 675 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 DUSP28Q4G0W2 176 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 SLC25A24Q6NUK1 477 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 HID1Q8IV36 788 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 TCF25Q9BQ70 676 aa13.2□□□□□ -0.3
SNED1-205ENST00000405547 CHCHD6Q9BRQ6 235 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms