RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 KLHL35Q6PF15 583 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 CYP2S1Q96SQ9 504 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 S100A13Q99584 98 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 BCO2Q9BYV7 579 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 PDP1Q9P0J1 537 aaPredicted RBP18■□□□□ 0.47
COL18A1-204ENST00000400337 BTBD3Q9Y2F9 522 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 CCDC162PA2VCL2 907 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 GABRDO14764 452 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 ETS2P15036 469 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 CDK9P50750 372 aaKnown RBP18■□□□□ 0.47
COL18A1-204ENST00000400337 RIPK1Q13546 671 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 RALGPS1Q5JS13 557 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 CDCA2Q69YH5 1023 aaPredicted RBP18■□□□□ 0.47
COL18A1-204ENST00000400337 ERICH5Q6P6B1 374 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 ANKRD46Q86W74 232 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 SH3GLB1Q9Y371 365 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 AK5Q9Y6K8 562 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 ROBO1Q9Y6N7 1651 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 SCNN1AP37088 669 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 NSG1P42857 185 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 CTSKP43235 329 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 SIM2Q14190 667 aaPredicted RBP17.99■□□□□ 0.47
COL18A1-204ENST00000400337 LIX1Q8N485 282 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 SUSD3Q96L08 255 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 EBPLQ9BY08 206 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 GULP1Q9UBP9 304 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 TTC24A2A3L6 582 aaPredicted RBP17.99■□□□□ 0.47
COL18A1-204ENST00000400337 TPP2P29144 1249 aaPredicted RBP17.99■□□□□ 0.47
COL18A1-204ENST00000400337 OGDHQ02218 1023 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 FBXL22Q6P050 247 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 UNC5BQ8IZJ1 945 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 CCNB1IP1Q9NPC3 277 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 INTS10Q9NVR2 710 aaKnown RBP17.99■□□□□ 0.47
COL18A1-204ENST00000400337 ERVW-1Q9UQF0 538 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 SLC10A7Q0GE19 358 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 TMEM63BQ5T3F8 832 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 SLC43A3Q8NBI5 491 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 ST13P5Q8NFI4 369 aaPredicted RBP17.99■□□□□ 0.47
COL18A1-204ENST00000400337 PIH1D2Q8WWB5 315 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 OSER1Q9NX31 292 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 GNEQ9Y223 722 aaKnown RBP17.99■□□□□ 0.47
COL18A1-204ENST00000400337 TP73O15350 636 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 SCN2BO60939 215 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 CHRNGP07510 517 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 PRDX6P30041 224 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 SLC5A9Q2M3M2 681 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 SLC35F5Q8WV83 523 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 BRINP2Q9C0B6 783 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 RASSF1Q9NS23 344 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 INTS7Q9NVH2 962 aaKnown RBP17.99■□□□□ 0.47
COL18A1-204ENST00000400337 MFHAS1Q9Y4C4 1052 aa17.99■□□□□ 0.47
COL18A1-204ENST00000400337 A0A0U1RQF3 1178 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 A0A1W2PRU2 124 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 ERVK-21P61565 698 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 PERM1Q5SV97 790 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 DNAJB7Q7Z6W7 309 aaPredicted RBP17.98■□□□□ 0.47
COL18A1-204ENST00000400337 KCTD13Q8WZ19 329 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 SLCO2A1Q92959 643 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 RASGRP1O95267 797 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 WDR4P57081 412 aaKnown RBP17.98■□□□□ 0.47
COL18A1-204ENST00000400337 NR1D2Q14995 579 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 RFTN2Q52LD8 501 aaPredicted RBP17.98■□□□□ 0.47
COL18A1-204ENST00000400337 SCAIQ8N9R8 606 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 FAM156AQ8NDB6 213 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 CADM1Q9BY67 442 aaKnown RBP17.98■□□□□ 0.47
COL18A1-204ENST00000400337 CCSER2Q9H7U1 834 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 ABCB10Q9NRK6 738 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 PPIEQ9UNP9 301 aaKnown RBP17.98■□□□□ 0.47
COL18A1-204ENST00000400337 HOXB6P17509 224 aaKnown RBP17.98■□□□□ 0.47
COL18A1-204ENST00000400337 IL12RB1P42701 662 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 GAD2Q05329 585 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 C7orf61Q8IZ16 206 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 OSBPL2Q9H1P3 480 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 COMMD3-BMI1R4GMX3 469 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 AKAP12Q02952 1782 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 ABCC6O95255 1503 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 NEMP2A6NFY4 417 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 F7P08709 466 aaPredicted RBP17.98■□□□□ 0.47
COL18A1-204ENST00000400337 SEC13P55735 322 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 RFTN1Q14699 578 aaPredicted RBP17.98■□□□□ 0.47
COL18A1-204ENST00000400337 ALG11Q2TAA5 492 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 C6orf52Q5T4I8 152 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 GCNT6Q5T4J0 391 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 OLFML1Q6UWY5 402 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 EBF4Q9BQW3 602 aa17.98■□□□□ 0.47
COL18A1-204ENST00000400337 MAPK12P53778 367 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 TAB1Q15750 504 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 PIGWQ7Z7B1 504 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 PRDM8Q9NQV8 689 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 ARHGEF3Q9NR81 526 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 SCAMP1O15126 338 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 ASLP04424 464 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 NR2F6P10588 404 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 COL6A1P12109 1028 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 SRP54P61011 504 aaKnown RBP17.97■□□□□ 0.47
COL18A1-204ENST00000400337 RGS21Q2M5E4 152 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 NDUFAF6Q330K2 333 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 EVA1BQ9NVM1 165 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 RWDD3Q9Y3V2 267 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 COLEC10Q9Y6Z7 277 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms