RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 NDUFA13Q9P0J0 144 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 EIF2B4Q9UI10 523 aaKnown RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 TRIM64A6NGJ6 449 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 OR51F1A6NGY5 319 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 TNFRSF10BO14763 440 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 NOBOXO60393 691 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 MAPK8P45983 427 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 PUM1Q14671 1186 aaKnown RBP eCLIP13.62□□□□□ -0.238e-10■□□□□ 9.7
VAPA-202ENST00000400000 XKR4Q5GH76 650 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 ALG1LQ6GMV1 187 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 MMAAQ8IVH4 418 aaKnown RBP13.62□□□□□ -0.23
VAPA-202ENST00000400000 C11orf24Q96F05 449 aaPredicted RBP13.62□□□□□ -0.23
VAPA-202ENST00000400000 AGAP2Q99490 1192 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 CKLFQ9UBR5 152 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 C15orf41Q9Y2V0 281 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 FAM172BPA6NC97 362 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 CRHR2Q13324 411 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 IL23RQ5VWK5 629 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 P4HA3Q7Z4N8 544 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 NET1Q7Z628 596 aaPredicted RBP13.62□□□□□ -0.23
VAPA-202ENST00000400000 RP9Q8TA86 221 aaKnown RBP13.62□□□□□ -0.23
VAPA-202ENST00000400000 MTERF1Q99551 399 aaKnown RBP13.62□□□□□ -0.23
VAPA-202ENST00000400000 MRTO4Q9UKD2 239 aaKnown RBP13.62□□□□□ -0.23
VAPA-202ENST00000400000 IL12AP29459 219 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 NDUFA9Q16795 377 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 TOR1AIP1Q5JTV8 583 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 MLIPQ5VWP3 458 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 ZNF570Q96NI8 536 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 DNAJC11Q9NVH1 559 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 BCL9O00512 1426 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 AHCYL1O43865 530 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 SULT2A1Q06520 285 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 DNASE1L3Q13609 305 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 PUS10Q3MIT2 529 aaKnown RBP13.62□□□□□ -0.23
VAPA-202ENST00000400000 NT5DC1Q5TFE4 455 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 TNFAIP8L2Q6P589 184 aaPredicted RBP13.62□□□□□ -0.23
VAPA-202ENST00000400000 TXNDC11Q6PKC3 985 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 UNC5BQ8IZJ1 945 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 DNAJC19Q96DA6 116 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 MFSD3Q96ES6 412 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 CRNNQ9UBG3 495 aaPredicted RBP13.62□□□□□ -0.23
VAPA-202ENST00000400000 R3HDM2Q9Y2K5 976 aaKnown RBP13.62□□□□□ -0.23
VAPA-202ENST00000400000 MYBPHLA2RUH7 354 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 BCAP31P51572 246 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 GCNT6Q5T4J0 391 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 TOP6BLQ8N6T0 577 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 ZNF615Q8N8J6 731 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 HPS1Q92902 700 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 TDRD1Q9BXT4 1180 aaKnown RBP13.62□□□□□ -0.23
VAPA-202ENST00000400000 ARL8BQ9NVJ2 186 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 RAPGEFL1Q9UHV5 662 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 FKBPLQ9UIM3 349 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 PCDHGC5Q9Y5F6 944 aa13.62□□□□□ -0.23
VAPA-202ENST00000400000 SLC35F4A4IF30 521 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 GLTPD2A6NH11 291 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 CSKP41240 450 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 NR0B1P51843 470 aaKnown RBP13.61□□□□□ -0.23
VAPA-202ENST00000400000 QPCTQ16769 361 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 GLYATQ6IB77 296 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 B3GNT6Q6ZMB0 384 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 DEPDC4Q8N2C3 294 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 MEIOBQ8N635 442 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 OR2T12Q8NG77 320 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 OR5AK3PQ8NH89 298 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 PYCR2Q96C36 320 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.61□□□□□ -0.233e-10■■■■■ 28.4
VAPA-202ENST00000400000 POLR3BQ9NW08 1133 aaPredicted RBP13.61□□□□□ -0.23
VAPA-202ENST00000400000 KCTD5Q9NXV2 234 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 ZMYM2Q9UBW7 1377 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 KIF20BQ96Q89 1820 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 ARHGEF33A8MVX0 844 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 TSPAN9O75954 239 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 ALPIP09923 528 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 IDO1P14902 403 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 PTPN2P17706 415 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 KELP23276 732 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 MSX1P28360 303 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 GSTT1P30711 240 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 PSMD7P51665 324 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 ARSHQ5FYA8 562 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 CLEC12AQ5QGZ9 265 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 PEX5LQ8IYB4 626 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 DBF4BQ8NFT6 615 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 OR10H4Q8NGA5 316 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 OR6K6Q8NGW6 343 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 KREMEN1Q96MU8 473 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 ZNF510Q9Y2H8 683 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 OR4F21O95013 312 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 ACP5P13686 325 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 SMARCB1Q12824 385 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 LARS2Q15031 903 aaKnown RBP13.61□□□□□ -0.23
VAPA-202ENST00000400000 HKDC1Q2TB90 917 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 VARS2Q5ST30 1063 aaKnown RBP13.61□□□□□ -0.23
VAPA-202ENST00000400000 DGLUCYQ7Z3D6 616 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 CPNE9Q8IYJ1 553 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 MREGQ8N565 214 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 SPOCK2Q92563 424 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 PDZD7Q9H5P4 517 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 FAM86C2PA6NEL3 165 aa13.61□□□□□ -0.23
VAPA-202ENST00000400000 WRBO00258 174 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms