RNA–Protein interactions for RNA: ENST00000399621.5

CACNA1C-212, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-212ENST00000399621 ZMPSTE24O75844 475 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 NR2F6P10588 404 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 RPL17P18621 184 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 CDK9P50750 372 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 ARHGAP40Q5TG30 622 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 CXorf57Q6NSI4 855 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 FUT10Q6P4F1 479 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 CREG2Q8IUH2 290 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 DENND6BQ8NEG7 585 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 TRPV1Q8NER1 839 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 CLP1Q92989 425 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 PIRTP0C851 137 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 KCNJ2P63252 427 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 DACT2Q5SW24 774 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 CFAP206Q8IYR0 622 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 ARL14EPQ8N8R7 260 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 ZBTB8BQ8NAP8 495 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 PFDN2Q9UHV9 154 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 GRIP1Q9Y3R0 1128 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 LOC110117498-PIK3R3F6TDL0 507 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 TRBC1P01850 177 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 FGF1P05230 155 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 PERM1Q5SV97 790 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 AUTS2Q8WXX7 1259 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 PIK3R3Q92569 461 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 PURBQ96QR8 312 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 CUEDC1Q9NWM3 386 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 ZNF490Q9ULM2 529 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 AP1M2Q9Y6Q5 423 aa10.95□□□□□ -0.66
CACNA1C-212ENST00000399621 TMEM150CB9EJG8 249 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 FAM153BP0C7A2 387 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 HOXB6P17509 224 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 CCNOP22674 350 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 SDC2P34741 201 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 MAPK14Q16539 360 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 CPSF6Q16630 551 aaKnown RBP eCLIP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 BMT2Q1RMZ1 405 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 FAM153CQ494X1 144 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 TMPRSS11BQ86T26 416 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 SLC9A9Q8IVB4 645 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 SLC34A3Q8N130 599 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 UPF1Q92900 1129 aaKnown RBP eCLIP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 RBM18Q96H35 190 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 TCF12Q99081 682 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 CDH19Q9H159 772 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 MAGEL2Q9UJ55 1249 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 PADI3Q9ULW8 664 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 CLUHO75153 1309 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 DDX3XO00571 662 aaKnown RBP eCLIP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 AKAP8O43823 692 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 SLC22A3O75751 556 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 C22orf31O95567 290 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 SAGP10523 405 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 MAXP61244 160 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 GCNT6Q5T4J0 391 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 SLC30A6Q6NXT4 461 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 ARCQ7LC44 396 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 ZBTB2Q8N680 514 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 ANKRD52Q8NB46 1076 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 KCT2Q8NC54 265 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 COPS8Q99627 209 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 RIOK2Q9BVS4 552 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 TDRD1Q9BXT4 1180 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 BTBD1Q9H0C5 482 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 MARCH7Q9H992 704 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 PLGRKTQ9HBL7 147 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 BBIP1A8MTZ0 92 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 TUBG1P23258 451 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 PPP3R1P63098 170 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 RNF43Q68DV7 783 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 SPATA6LQ8N4H0 392 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 ZNF670Q9BS34 389 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 OSBPL11Q9BXB4 747 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 LHX5Q9H2C1 402 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 TLR9Q9NR96 1032 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 CYP8B1Q9UNU6 501 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 PRSS55Q6UWB4 352 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 ZNF572Q7Z3I7 529 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 CHST4Q8NCG5 386 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 FAM13CQ8NE31 585 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 ACMSDQ8TDX5 336 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 RNF157Q96PX1 679 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 ACO2Q99798 780 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 ZSCAN5AQ9BUG6 496 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 LACRTQ9GZZ8 138 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 PNPLA3Q9NST1 481 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 SNX7Q9UNH6 387 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 IFT52Q9Y366 437 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 FADS2O95864 444 aaKnown RBP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 CCR3P51677 355 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 NAGLUP54802 743 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 SEC23AQ15436 765 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 NTRK3Q16288 839 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 PLEKHG6Q3KR16 790 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 OGFRL1Q5TC84 451 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 CNKSR3Q6P9H4 555 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 OR2AJ1Q8NGZ0 328 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 HDAC7Q8WUI4 952 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 RIT1Q92963 219 aa10.94□□□□□ -0.66
CACNA1C-212ENST00000399621 PTPN18Q99952 460 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms