RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 FFAR2O15552 330 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CBFA2T3O75081 653 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 POP7O75817 140 aaKnown RBP12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 AP2A2O94973 939 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 RPS3P23396 243 aaKnown RBP eCLIP12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ABCG1P45844 678 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 MGAT5Q09328 741 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 THOC5Q13769 683 aaKnown RBP12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GTF2H3Q13889 308 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LRP8Q14114 963 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 EFTUD2Q15029 972 aaKnown RBP eCLIP12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 DEFB133Q30KQ1 61 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 UAP1L1Q3KQV9 507 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CNSTQ6PJW8 725 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 C3orf62Q6ZUJ4 267 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CYS1Q717R9 158 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PIP4P1Q86T03 277 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LMNTD2Q8IXW0 634 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FSTL5Q8N475 847 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 OTUD6BQ8N6M0 293 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 BAHD1Q8TBE0 780 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 HEXDCQ8WVB3 486 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 DCUN1D1Q96GG9 259 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TTC25Q96NG3 672 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CAMK1GQ96NX5 476 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TCF12Q99081 682 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 MCMBPQ9BTE3 642 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FUT8Q9BYC5 575 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SPATS2LQ9NUQ6 558 aaKnown RBP12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 U3KQA8 63 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CFAP54Q96N23 3096 aa12.21□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SH3BP5O60239 455 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 NDUFS3O75489 264 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 HAUS5O94927 633 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 AHSGP02765 367 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GSTA2P09210 222 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 RALBP11234 206 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CTSEP14091 401 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 BRAFP15056 766 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PMLP29590 882 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PBLDP30039 288 aaPredicted RBP12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 LEPRP48357 1165 aaKnown RBP12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CLCNKAP51800 687 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ADARP55265 1226 aaKnown RBP12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 TUBB4BP68371 445 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ARHGAP8P85298 464 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 DMPKQ09013 629 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ILF3Q12906 894 aaKnown RBP eCLIP12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SLC14A1Q13336 389 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 NFE2L1Q14494 772 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ELOCQ15369 112 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 WDR93Q6P2C0 686 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SLC30A9Q6PML9 568 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SDCCAG8Q86SQ7 713 aaPredicted RBP12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PALM2Q8IXS6 379 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 KRT222Q8N1A0 295 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 EID2Q8N6I1 236 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 OR2L2Q8NH16 312 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 OR4C6Q8NH72 309 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CALML6Q8TD86 181 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 FBF1Q8TES7 1133 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PATE1Q8WXA2 126 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SCG3Q8WXD2 468 aaKnown RBP12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 UBXN4Q92575 508 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ZNF514Q96K75 400 aaPredicted RBP12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 KLC4Q9NSK0 619 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 INTS10Q9NVR2 710 aaKnown RBP12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 NLGN3Q9NZ94 848 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 TAAR2Q9P1P5 351 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 TBC1D29Q9UFV1 150 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 DNAJC16Q9Y2G8 782 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CRYL1Q9Y2S2 319 aa12.2□□□□□ -0.46
HLA-DQB1-203ENST00000399082 UBA6A0AVT1 1052 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 MGAT4DA6NG13 374 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 TPP1O14773 563 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 FLRT2O43155 660 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 NOBOXO60393 691 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 NIPSNAP2O75323 286 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 MYF5P13349 255 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 FMO4P31512 558 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CCR7P32248 378 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ACTR1BP42025 376 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 EIF3BP55884 814 aaKnown RBP12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ACTR1AP61163 376 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 TIAL1Q01085 375 aaKnown RBP eCLIP12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 INSCQ1MX18 579 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PROX2Q3B8N5 592 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 KBTBD12Q3ZCT8 623 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 RBM20Q5T481 1227 aaKnown RBP12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 RNF187Q5TA31 235 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ZNF449Q6P9G9 518 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 NAPRTQ6XQN6 538 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 KIAA0408Q6ZU52 694 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 TAF8Q7Z7C8 310 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GALNT7Q86SF2 657 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 AMZ2Q86W34 360 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 LRRC6Q86X45 466 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 C17orf82Q86X59 251 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 NAXDQ8IW45 347 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SLC35F3Q8IY50 421 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms