RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 USP9XQ93008 2570 aaPredicted RBP13.18□□□□□ -0.3
VCX3A-202ENST00000398729 PRR19A6NJB7 356 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 EFCAB7A8K855 629 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 A8MU76 341 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 B4E171 279 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.18□□□□□ -0.3
VCX3A-202ENST00000398729 STMND1H3BQB6 276 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 GPR39O43194 453 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 PRAMEF1O95521 474 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 FTCDO95954 541 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 RPL10P27635 214 aaKnown RBP13.18□□□□□ -0.3
VCX3A-202ENST00000398729 SLC19A1P41440 591 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 TSPAN7P41732 249 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 HALP42357 657 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 RAB15P59190 212 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 PDE1BQ01064 536 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 MANEAQ5SRI9 462 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 GPRC6AQ5T6X5 926 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 AGAP9Q5VTM2 703 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 TMEM26Q6ZUK4 368 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 C11orf96Q7Z7L8 435 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 AMZ2Q86W34 360 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 DTX1Q86Y01 620 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 PLXDC1Q8IUK5 500 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 LURAP1LQ8IV03 231 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 RASGEF1AQ8N9B8 481 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 OR4K2Q8NGD2 314 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 ZNF398Q8TD17 642 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 CXorf40BQ96DE9 158 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 APOL2Q9BQE5 337 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 DDA1Q9BW61 102 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 ASPSCR1Q9BZE9 553 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 POT1Q9NUX5 634 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 SMOXQ9NWM0 555 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 OCIAD1Q9NX40 245 aa13.18□□□□□ -0.3
VCX3A-202ENST00000398729 FEZ2Q9UHY8 353 aaPredicted RBP13.18□□□□□ -0.3
VCX3A-202ENST00000398729 DNMT3AQ9Y6K1 912 aaPredicted RBP13.18□□□□□ -0.3
VCX3A-202ENST00000398729 A0A0U1RQJ8 604 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 GAPDHSO14556 408 aaPredicted RBP13.17□□□□□ -0.3
VCX3A-202ENST00000398729 SUV39H1O43463 412 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 POP7O75817 140 aaKnown RBP13.17□□□□□ -0.3
VCX3A-202ENST00000398729 CRTAMO95727 393 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 BRAFP15056 766 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 AMD1P17707 334 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 MSH3P20585 1137 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 AKT1P31749 480 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 ATP1A2P50993 1020 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 DRG2P55039 364 aaKnown RBP13.17□□□□□ -0.3
VCX3A-202ENST00000398729 OLIG2Q13516 323 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 PTPRCAPQ14761 206 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 LONRF2Q1L5Z9 754 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 DCAF12Q5T6F0 453 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 TMEM220Q6QAJ8 160 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 ARHGEF18Q6ZSZ5 1173 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 ARHGAP22Q7Z5H3 698 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 RBM12BQ8IXT5 1001 aaKnown RBP13.17□□□□□ -0.3
VCX3A-202ENST00000398729 RNF10Q8N5U6 811 aaKnown RBP13.17□□□□□ -0.3
VCX3A-202ENST00000398729 FAM71DQ8N9W8 422 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 EXTL1Q92935 676 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 ZNF514Q96K75 400 aaPredicted RBP13.17□□□□□ -0.3
VCX3A-202ENST00000398729 TBL1YQ9BQ87 522 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 FAM117AQ9C073 453 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 ASB8Q9H765 288 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 KLHL3Q9UH77 587 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 B3GALT1Q9Y5Z6 326 aa13.17□□□□□ -0.3
VCX3A-202ENST00000398729 ZNF106Q9H2Y7 1883 aaKnown RBP13.16□□□□□ -0.3
VCX3A-202ENST00000398729 MN1Q10571 1320 aaPredicted RBP13.16□□□□□ -0.3
VCX3A-202ENST00000398729 OR2AG2A6NM03 316 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 OR52A4PA6NMU1 304 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 DDX3YO15523 660 aaKnown RBP13.16□□□□□ -0.3
VCX3A-202ENST00000398729 SRP72O76094 671 aaKnown RBP13.16□□□□□ -0.3
VCX3A-202ENST00000398729 UBXN7O94888 489 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 CTSCP53634 463 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 DMPKQ09013 629 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 KLF1Q13351 362 aaPredicted RBP13.16□□□□□ -0.3
VCX3A-202ENST00000398729 PARP6Q2NL67 630 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 ANKS6Q68DC2 871 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 VASH2Q86V25 355 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 KLHDC8BQ8IXV7 354 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 BMPERQ8N8U9 685 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 ZSCAN1Q8NBB4 408 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 PMEPA1Q969W9 287 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 SGF29Q96ES7 293 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 HES6Q96HZ4 224 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 TEFMQ96QE5 360 aaKnown RBP13.16□□□□□ -0.3
VCX3A-202ENST00000398729 C19orf43Q9BQ61 176 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 TSGA10Q9BZW7 698 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 ARNT2Q9HBZ2 717 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 SLC40A1Q9NP59 571 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 FKBPLQ9UIM3 349 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 SLC30A1Q9Y6M5 507 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 CAPN6Q9Y6Q1 641 aa13.16□□□□□ -0.3
VCX3A-202ENST00000398729 C9P02748 559 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 TYRP1P17643 537 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 PBLDP30039 288 aaPredicted RBP13.15□□□□□ -0.3
VCX3A-202ENST00000398729 CA5AP35218 305 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 HADHAP40939 763 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 ARSDP51689 593 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 GFERP55789 205 aa13.15□□□□□ -0.3
VCX3A-202ENST00000398729 GSDMDP57764 484 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms