RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 IGKV6D-21A0A0A0MT36 114 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 A8MT66 165 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 LOC110117498-PIK3R3F6TDL0 507 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 SOCS7O14512 581 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 SMPD1P17405 629 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 CYP2A13Q16696 494 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 PTCHD4Q6ZW05 846 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 VANGL1Q8TAA9 524 aaPredicted RBP10.65□□□□□ -0.7
CCDC40-204ENST00000397545 ZNF671Q8TAW3 534 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 STYXQ8WUJ0 223 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 FEM1CQ96JP0 617 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 OSBPL10Q9BXB5 764 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 PDE10AQ9Y233 779 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 PCNTO95613 3336 aa10.65□□□□□ -0.71
CCDC40-204ENST00000397545 PSME4Q14997 1843 aa10.65□□□□□ -0.71
CCDC40-204ENST00000397545 SSC5DA1L4H1 1573 aa10.65□□□□□ -0.71
CCDC40-204ENST00000397545 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 NRP1O14786 923 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 KLF11O14901 512 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 RGS10O43665 173 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 NPHS1O60500 1241 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 RNASEH1O60930 286 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 NIPSNAP2O75323 286 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 TRBC1P01850 177 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 UGT2B4P06133 528 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 TCF3P15923 654 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 PRKCHP24723 683 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 SLC26A3P40879 764 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 CCT3P49368 545 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 ECT2LQ008S8 904 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 STX4Q12846 297 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 ILF2Q12905 390 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 PYDC2Q56P42 97 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 WDTC1Q8N5D0 677 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 S100ZQ8WXG8 99 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 C1GALT1C1Q96EU7 318 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 TDRD1Q9BXT4 1180 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 EBPLQ9BY08 206 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 ZCCHC2Q9C0B9 1178 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 BRD9Q9H8M2 597 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 SIRPGQ9P1W8 387 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 COL11A1P12107 1806 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 A0A0G2JLL6 359 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 BHMG1C9JSJ3 638 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 RPLP2P05387 115 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 HLA-DQB2P05538 268 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 PRKAR2AP13861 404 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 UGT1A6P19224 532 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 CAPGP40121 348 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 CLDN10P78369 228 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 NAE1Q13564 534 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 PTPRCAPQ14761 206 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 TAB1Q15750 504 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 SYT16Q17RD7 645 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 TIGD5Q53EQ6 642 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 CCNYL2Q5T2Q4 361 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 PRRT2Q7Z6L0 340 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 IZUMO1Q8IYV9 350 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 RTL3Q8N8U3 475 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 SLC35F5Q8WV83 523 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 TMEM74Q96NL1 305 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 HMX1Q9NP08 348 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 EIF2B3Q9NR50 452 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 ADAM30Q9UKF2 790 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 SLC9A8Q9Y2E8 581 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 KCTD3Q9Y597 815 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 N6AMT1Q9Y5N5 214 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 MYO10Q9HD67 2058 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 POLR2AP24928 1970 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 CNMDO75829 334 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 RSL1D1O76021 490 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 PGLSO95336 258 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 PRAMEF1O95521 474 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 IL6P05231 212 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 TNNI3P19429 210 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 TACR2P21452 398 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 RPIAP49247 311 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 GLUD2P49448 558 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 PTPN5P54829 565 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 MXD1Q05195 221 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 CBX3Q13185 183 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 PCBP1Q15365 356 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 RABL3Q5HYI8 236 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 EMC10Q5UCC4 262 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 KIAA0930Q6ICG6 404 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 SDE2Q6IQ49 451 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 NEK10Q6ZWH5 1172 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 DEPDC4Q8N2C3 294 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 DENND1AQ8TEH3 1009 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 SLC9A7Q96T83 725 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 CORO1BQ9BR76 489 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 TNKS2Q9H2K2 1166 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 DNAJB4Q9UDY4 337 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 COQ6Q9Y2Z9 468 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 TESMINQ9Y4I5 508 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 SPACA6W5XKT8 324 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 SLC7A4O43246 635 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 SERPINA1P01009 418 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 ALDOAP04075 364 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 UROSP10746 265 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms