RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 KLK13Q9UKR3 277 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 PRSS21Q9Y6M0 314 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 PIKFYVEQ9Y2I7 2098 aa20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 MGAT4DA6NG13 374 aa20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 RHPN2P1A8MT19 583 aa20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 GOLGA8KD6RF30 607 aa20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 GOLGA8TH3BQL2 631 aa20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 OR1I1O60431 355 aa20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 MSS51Q4VC12 460 aa20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 TMEM135Q86UB9 458 aa20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 OR2L2Q8NH16 312 aa20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 LINC00615Q96LM1 132 aaPredicted RBP20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 PWWP2AQ96N64 755 aa20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 FCRL3Q96P31 734 aaPredicted RBP20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 SCNM1Q9BWG6 230 aa20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 SCHIP1Q9P0W5 487 aaPredicted RBP20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 PTPRBP23467 1997 aa20.81■□□□□ 0.92
TSPAN4-206ENST00000397408 KIR2DS5A0A0G2JLQ3 304 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 A0A0G2JNG1 304 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 KIR2DS3K7RE56 304 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 CASC3O15234 703 aaKnown RBP20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 TP73O15350 636 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 USP1O94782 785 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 AP2A2O94973 939 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 PPARGP37231 505 aaPredicted RBP20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 FASLGP48023 281 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 ARCN1P48444 511 aaKnown RBP20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 TTPAP49638 278 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 FOXK2Q01167 660 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 TUBB2AQ13885 445 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 KIR2DS5Q14953 304 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 HIF1AQ16665 826 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 TMPRSS7Q7RTY8 843 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 PDIK1LQ8N165 341 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 GALNT15Q8N3T1 639 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 Q8N9G6 341 aaPredicted RBP20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 BBOF1Q8ND07 529 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 TUBB2BQ9BVA1 445 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 VPS37BQ9H9H4 285 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 IL1RAPL1Q9NZN1 696 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 ANGPTL2Q9UKU9 493 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 UTP11Q9Y3A2 253 aaKnown RBP20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 KNTC1P50748 2209 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 CEP295Q9C0D2 2601 aa20.8■□□□□ 0.92
TSPAN4-206ENST00000397408 ZCWPW2A0A1B0GU75 182 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 KLHL33A6NCF5 533 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 OR5K4A6NMS3 321 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 NDC80O14777 642 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 PPM1DO15297 605 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 BRAFP15056 766 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 PNLIPP16233 465 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 PGAM1P18669 254 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 ARL4CP56559 192 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 HHEXQ03014 270 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 CALCOCO2Q13137 446 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 AGAP9Q5VTM2 703 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 DUPD1Q68J44 220 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 MRNIPQ6NTE8 343 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 C8orf74Q6P047 294 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 WASH2PQ6VEQ5 465 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 ZNF438Q7Z4V0 828 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 SPRED1Q7Z699 444 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 SLC9B2Q86UD5 537 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 TMPRSS12Q86WS5 348 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 CCNJLQ8IV13 435 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 HM13Q8TCT9 377 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 EBNA1BP2Q99848 306 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 CCM2Q9BSQ5 444 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 RAB17Q9H0T7 212 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 STN1Q9H668 368 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 WASH6PQ9NQA3 447 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 WHRNQ9P202 907 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 WDR37Q9Y2I8 494 aa20.79■□□□□ 0.92
TSPAN4-206ENST00000397408 FAM149AA5PLN7 773 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 QSOX1O00391 747 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 RPLP0P05388 317 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 POLBP06746 335 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 SHC2P98077 582 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 METRNLQ641Q3 311 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 ABRAXAS1Q6UWZ7 409 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 XKR5Q6UX68 686 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 MARCH9Q86YJ5 346 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 LILRA3Q8N6C8 439 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 MNS1Q8NEH6 495 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 SARS2Q9NP81 518 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 PSMD13Q9UNM6 376 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 OR52A4PA6NMU1 304 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 NDUFS3O75489 264 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 MT-CO3P00414 261 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 FTH1P02794 183 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 OR56A5P0C7T3 313 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 HALP42357 657 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 UBE2IP63279 158 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 CCL7P80098 99 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 CRYMQ14894 314 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 NR1D2Q14995 579 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 LONRF1Q17RB8 773 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 HP1BP3Q5SSJ5 553 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 CDCP2Q5VXM1 449 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms