RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 CACNA1IQ9P0X4 2223 aa23.21■■□□□ 1.31
TSPAN4-202ENST00000397396 BDP1A6H8Y1 2624 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 CCDC189A1A4V9 331 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 PRR33A8MZF0 331 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 H3BQF6 201 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 GOLGA8RI6L899 631 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 KMOO15229 486 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 PRPF4O43172 522 aaKnown RBP eCLIP23.2■■□□□ 1.39e-7■■■■□ 19.8
TSPAN4-202ENST00000397396 GRID2O43424 1007 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 ENO3P13929 434 aaPredicted RBP23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 VCLP18206 1134 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 DGKAP23743 735 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 CRHR1P34998 444 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 DPP6P42658 865 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 CTSCP53634 463 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 SLC18A1P54219 525 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 SYTL3Q4VX76 610 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 AGAP9Q5VTM2 703 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 Q6ZSR6 202 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 SH2D5Q6ZV89 423 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 TMEFF1Q8IYR6 380 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 KRT222Q8N1A0 295 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 BANPQ8N9N5 519 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 MFSD2AQ8NA29 543 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 SIDT2Q8NBJ9 832 aaKnown RBP23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 ASZ1Q8WWH4 475 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 KLHDC7BQ96G42 594 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 SCARF2Q96GP6 870 aaPredicted RBP23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 TMEM98Q9Y2Y6 226 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 ZDBF2Q9HCK1 2354 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 TRIOO75962 3097 aa23.2■■□□□ 1.3
TSPAN4-202ENST00000397396 IQCF5A8MTL0 148 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 H0Y8X5 98 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 SGTAO43765 313 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 DNAJC6O75061 913 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 WISP3O95389 354 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 THEGLP0DJG4 465 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 CD38P28907 300 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 IL2P60568 153 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 LYSMD4Q5XG99 296 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 PMS2CLQ68D20 193 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 PIM3Q86V86 326 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 GALNT13Q8IUC8 556 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 RGL4Q8IZJ4 473 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 OR13H1Q8NG92 308 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 HM13Q8TCT9 377 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 ELMO1Q92556 727 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 SLC6A18Q96N87 628 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 GPR27Q9NS67 375 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 KLQ9UEF7 1012 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 GRID1Q9ULK0 1009 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 CA5BQ9Y2D0 317 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 PCDHGA2Q9Y5H1 932 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 EML5Q05BV3 1969 aa23.19■■□□□ 1.3
TSPAN4-202ENST00000397396 PRR5-ARHGAP8B1AHC4 643 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 LIN7AO14910 233 aaPredicted RBP23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 TM9SF1O15321 606 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 LILRB5O75023 590 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 KLHL2O95198 593 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 CEACAM5P06731 702 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 LTA4HP09960 611 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 ITGB6P18564 788 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 NR1D1P20393 614 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 AOAHP28039 575 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 HPDP32754 393 aaPredicted RBP23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 ATP6V0D1P61421 351 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 PPP2R2AP63151 447 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 TIAL1Q01085 375 aaKnown RBP eCLIP23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 ZNF460Q14592 562 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 ANGPT1Q15389 498 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 SEPT7Q16181 437 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 PAQR3Q6TCH7 311 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 ENPP7Q6UWV6 458 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 CEP68Q76N32 757 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 CLEC14AQ86T13 490 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 OXR1Q8N573 874 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 DEFB119Q8N690 84 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 LKAAEAR1Q8TD35 194 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 TIMM29Q9BSF4 260 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 SLC13A1Q9BZW2 595 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 MIR1-1HGQ9H1L0 117 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 CNOT10Q9H9A5 744 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 NMRAL1Q9HBL8 299 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 KCNK9Q9NPC2 374 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 NKIRAS1Q9NYS0 192 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 SUSD2Q9UGT4 822 aa23.18■■□□□ 1.3
TSPAN4-202ENST00000397396 PRSS38A1L453 326 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 TMEM202A6NGA9 273 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 FOXO6A8MYZ6 492 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 TYROBPO43914 113 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 GPR37L1O60883 481 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 ZWINTO95229 277 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 SP9P0CG40 484 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 CCR7P32248 378 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 MAPK9P45984 424 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 PPM1JQ5JR12 505 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 CRTC3Q6UUV7 619 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 AMZ2Q86W34 360 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 OR2L2Q8NH16 312 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms