RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 SBSNQ6UWP8 590 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 TMC5Q6UXY8 1006 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.98□□□□□ -0.49
ITGB1-202ENST00000396033 MRGPRX3Q96LB0 322 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 LRRC3BQ96PB8 259 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 COPS8Q99627 209 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 NDE1Q9NXR1 346 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 ZDHHC3Q9NYG2 299 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 CCDC167Q9P0B6 97 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 STX18Q9P2W9 335 aaKnown RBP11.98□□□□□ -0.49
ITGB1-202ENST00000396033 CD84Q9UIB8 345 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 TBX10O75333 385 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 LEFTY1O75610 366 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 PRDX3P30048 256 aaKnown RBP11.98□□□□□ -0.49
ITGB1-202ENST00000396033 DGKGP49619 791 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 MTTPP55157 894 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 SLC34A1Q06495 639 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 ZDHHC20Q5W0Z9 365 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 BNC2Q6ZN30 1099 aaPredicted RBP11.98□□□□□ -0.49
ITGB1-202ENST00000396033 SYVN1Q86TM6 617 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 MYLK4Q86YV6 388 aaPredicted RBP11.98□□□□□ -0.49
ITGB1-202ENST00000396033 SNX31Q8N9S9 440 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 HMGCLL1Q8TB92 370 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 FRS2Q8WU20 508 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 TUBB1Q9H4B7 451 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 CERS4Q9HA82 394 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 GIMAP2Q9UG22 337 aa11.98□□□□□ -0.49
ITGB1-202ENST00000396033 PRPF19Q9UMS4 504 aaKnown RBP11.98□□□□□ -0.49
ITGB1-202ENST00000396033 AGAP14A8MT82 685 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 E2F3O00716 465 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 RAD51BO15315 384 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 CFLARO15519 480 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 LINC00032P0C843 101 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 SPINT3P49223 89 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 KIF19Q2TAC6 998 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 PLPP6Q8IY26 295 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 GALNT15Q8N3T1 639 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 DRAXINQ8NBI3 349 aaPredicted RBP11.97□□□□□ -0.49
ITGB1-202ENST00000396033 TUBGCP3Q96CW5 907 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 SERPINI1Q99574 410 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 APOL5Q9BWW9 433 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 FAM126AQ9BYI3 521 aaPredicted RBP11.97□□□□□ -0.49
ITGB1-202ENST00000396033 MCOLN1Q9GZU1 580 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 WDR41Q9HAD4 459 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 PKD2L2Q9NZM6 624 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 PACSIN3Q9UKS6 424 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 TIMM22Q9Y584 194 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 WASF2Q9Y6W5 498 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 ANKRD12Q6UB98 2062 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 FFAR2O15552 330 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 ESRRBO95718 433 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 ALDOCP09972 364 aaKnown RBP11.97□□□□□ -0.49
ITGB1-202ENST00000396033 CYP2A6P11509 494 aaPredicted RBP11.97□□□□□ -0.49
ITGB1-202ENST00000396033 ARL1P40616 181 aaPredicted RBP11.97□□□□□ -0.49
ITGB1-202ENST00000396033 VIPR2P41587 438 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 PTK2BQ14289 1009 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 TAF11Q15544 211 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 TTLL9Q3SXZ7 439 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 MMEL1Q495T6 779 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 ARSIQ5FYB1 569 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 GPRIN3Q6ZVF9 776 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 PGAM4Q8N0Y7 254 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 OSCP1Q8WVF1 389 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 ULK4Q96C45 1275 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 RSPRY1Q96DX4 576 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 MRPL1Q9BYD6 325 aaKnown RBP11.97□□□□□ -0.49
ITGB1-202ENST00000396033 MTG2Q9H4K7 406 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 POLG2Q9UHN1 485 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 ANGPTL2Q9UKU9 493 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 POMPQ9Y244 141 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 GUCA1CO95843 209 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 CHEK2O96017 543 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 ADH1CP00326 375 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 ATP4BP51164 291 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 AP2B1P63010 937 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 C18orf21Q32NC0 220 aaPredicted RBP11.97□□□□□ -0.49
ITGB1-202ENST00000396033 C9orf50Q5SZB4 431 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 GPRC6AQ5T6X5 926 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 SPATA16Q9BXB7 569 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 NUSAP1Q9BXS6 441 aaKnown RBP11.97□□□□□ -0.49
ITGB1-202ENST00000396033 IRAK4Q9NWZ3 460 aa11.97□□□□□ -0.49
ITGB1-202ENST00000396033 VIPR1P32241 457 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 STX5Q13190 355 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 SLC30A9Q6PML9 568 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 EFL1Q7Z2Z2 1120 aaKnown RBP11.96□□□□□ -0.49
ITGB1-202ENST00000396033 C12orf40Q86WS4 652 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 ZNF366Q8N895 744 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 OR9I1Q8NGQ6 314 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 CDRT15Q96T59 188 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 LATS2Q9NRM7 1088 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 IL36AQ9UHA7 158 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 ADAMTS6Q9UKP5 1117 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 OARD1Q9Y530 152 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 TNPO3Q9Y5L0 923 aaKnown RBP11.96□□□□□ -0.49
ITGB1-202ENST00000396033 UROSP10746 265 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 GRB7Q14451 532 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 POM121L1PQ3SYA9 428 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 PAOXQ6QHF9 649 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 DCBLD1Q8N8Z6 715 aa11.96□□□□□ -0.49
ITGB1-202ENST00000396033 HIPK4Q8NE63 616 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms