RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ZNF75CPQ92670 426 aaPredicted RBP20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 NECAB3Q96P71 396 aaPredicted RBP20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 TEX101Q9BY14 249 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 TPSD1Q9BZJ3 242 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 EPHX3Q9H6B9 360 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 MANSC1Q9H8J5 431 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 FZD3Q9NPG1 666 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 KLHL42Q9P2K6 505 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 GMNCA6NCL1 334 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 TCP11X1B4DZS4 312 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 G3V2L1 256 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 KPNA5O15131 536 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 TSPAN12O95859 305 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 SBK3P0C264 359 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 TAC1P20366 129 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 IGFALSP35858 605 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 MTAPQ13126 283 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 ZYG11AQ6WRX3 759 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 C10orf107Q8IVU9 208 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 ELMO1Q92556 727 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 PTERQ96BW5 349 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 CHMP6Q96FZ7 201 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 TOE1Q96GM8 510 aaKnown RBP20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 MYOCQ99972 504 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 EPN3Q9H201 632 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 TFB2MQ9H5Q4 396 aaKnown RBP20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 PHPT1Q9NRX4 125 aaPredicted RBP20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 TSR3Q9UJK0 312 aaKnown RBP20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 OR1A2Q9Y585 309 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 TRIOO75962 3097 aa20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 SRRM3A6NNA2 597 aaPredicted RBP20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 TARM1B6A8C7 271 aa20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 VIMP08670 466 aaKnown RBP20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 AOAHP28039 575 aa20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 TRIM23P36406 574 aa20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 BOP1Q14137 746 aaKnown RBP20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 CHI3L2Q15782 390 aa20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 DOK6Q6PKX4 331 aa20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 PPP1R14CQ8TAE6 165 aa20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 SREK1Q8WXA9 508 aaKnown RBP20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 PDLIM5Q96HC4 596 aaKnown RBP20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 CCM2Q9BSQ5 444 aa20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 LGR4Q9BXB1 951 aa20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 SIRPGQ9P1W8 387 aa20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 TMEM98Q9Y2Y6 226 aa20.1■□□□□ 0.81
VCPKMT-202ENST00000395860 BTN3A1O00481 513 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 CBSLP0DN79 551 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 ZNF8P17098 575 aaPredicted RBP20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 CD6P30203 668 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 CBSP35520 551 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 GABPB1Q06547 395 aaPredicted RBP20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 SIGLEC14Q08ET2 396 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 BCL7AQ4VC05 210 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 ACSBG2Q5FVE4 666 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 RGS9BPQ6ZS82 235 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 TRAPPC5Q8IUR0 188 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 MYO1HQ8N1T3 1032 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 CAMKK1Q8N5S9 505 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 DENND6BQ8NEG7 585 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 RHEBL1Q8TAI7 183 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 STAG3L4Q8TBR4 150 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 KIAA1191Q96A73 305 aa20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 ZNF514Q96K75 400 aaPredicted RBP20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 ZNF317Q96PQ6 595 aaPredicted RBP20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 C6orf106Q9H6K1 298 aaPredicted RBP20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 WSB2Q9NYS7 404 aaPredicted RBP20.09■□□□□ 0.81
VCPKMT-202ENST00000395860 NPEPPSL1A6NEC2 478 aa20.08■□□□□ 0.81
VCPKMT-202ENST00000395860 HSPA14Q0VDF9 509 aa20.08■□□□□ 0.81
VCPKMT-202ENST00000395860 OR4D1Q15615 310 aa20.08■□□□□ 0.81
VCPKMT-202ENST00000395860 PLEKHS1Q5SXH7 462 aa20.08■□□□□ 0.81
VCPKMT-202ENST00000395860 PIWIL4Q7Z3Z4 852 aaKnown RBP20.08■□□□□ 0.81
VCPKMT-202ENST00000395860 RAB3IL1Q8TBN0 382 aa20.08■□□□□ 0.81
VCPKMT-202ENST00000395860 RLN3Q8WXF3 142 aa20.08■□□□□ 0.81
VCPKMT-202ENST00000395860 FUBP1Q96AE4 644 aaKnown RBP20.08■□□□□ 0.81
VCPKMT-202ENST00000395860 IER2Q9BTL4 223 aa20.08■□□□□ 0.81
VCPKMT-202ENST00000395860 OXSMQ9NWU1 459 aa20.08■□□□□ 0.81
VCPKMT-202ENST00000395860 GPR34Q9UPC5 381 aa20.08■□□□□ 0.81
VCPKMT-202ENST00000395860 CDC7O00311 574 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 FPGTO14772 594 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 MYCLP1P12525 358 aaPredicted RBP20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 HNRNPA2B1P22626 353 aaKnown RBP20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 PBLDP30039 288 aaPredicted RBP20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 PXNP49023 591 aaPredicted RBP20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 TSNQ15631 228 aaKnown RBP20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 ATG16L1Q676U5 607 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 KIAA0895LQ68EN5 471 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 LRRC34Q8IZ02 419 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 ASZ1Q8WWH4 475 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 FOXJ1Q92949 421 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 EXT2Q93063 718 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 APOOQ9BUR5 198 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 GPR174Q9BXC1 333 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 RABEP2Q9H5N1 569 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 FAM8A1Q9UBU6 413 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 IKZF3Q9UKT9 509 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 RNF112Q9ULX5 631 aa20.08■□□□□ 0.8
VCPKMT-202ENST00000395860 EIF3FO00303 357 aaPredicted RBP20.07■□□□□ 0.8
VCPKMT-202ENST00000395860 LATO43561 262 aa20.07■□□□□ 0.8
VCPKMT-202ENST00000395860 DLX3O60479 287 aa20.07■□□□□ 0.8
VCPKMT-202ENST00000395860 TRIM13O60858 407 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms