RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 KLHL35Q6PF15 583 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 DET1Q7L5Y6 550 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 HEXDCQ8WVB3 486 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 WBP1Q96G27 269 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 HES6Q96HZ4 224 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 ZPBPQ9BS86 351 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 LRRC40Q9H9A6 602 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 ARNT2Q9HBZ2 717 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 SLC40A1Q9NP59 571 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 OCIAD1Q9NX40 245 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 FKBPLQ9UIM3 349 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 GUCA1BQ9UMX6 200 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 SLC30A1Q9Y6M5 507 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 ARHGEF17Q96PE2 2063 aaPredicted RBP13.49□□□□□ -0.25
CXCL12-205ENST00000395794 BPTFQ12830 3046 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 OR52A4PA6NMU1 304 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 DDX3YO15523 660 aaKnown RBP13.49□□□□□ -0.25
CXCL12-205ENST00000395794 GPR39O43194 453 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 RASSF9O75901 435 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 GAS8O95995 478 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 BRAFP15056 766 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 PBLDP30039 288 aaPredicted RBP13.49□□□□□ -0.25
CXCL12-205ENST00000395794 CTSCP53634 463 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 TMPRSS15P98073 1019 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 MC2RQ01718 297 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 DMPKQ09013 629 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 KLF1Q13351 362 aaPredicted RBP13.49□□□□□ -0.25
CXCL12-205ENST00000395794 OLIG2Q13516 323 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 ANKS6Q68DC2 871 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 CEACAM20Q6UY09 585 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 ARHGAP22Q7Z5H3 698 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 C11orf96Q7Z7L8 435 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 IL22RA1Q8N6P7 574 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 SGF29Q96ES7 293 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 ZDHHC12Q96GR4 267 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 TGM7Q96PF1 710 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 C19orf43Q9BQ61 176 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 TMEM121Q9BTD3 319 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 FRMD8P1Q9BZ68 369 aaPredicted RBP13.49□□□□□ -0.25
CXCL12-205ENST00000395794 KCTD3Q9Y597 815 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 B3GALT1Q9Y5Z6 326 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 CAPN6Q9Y6Q1 641 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 UNC13CQ8NB66 2214 aa13.49□□□□□ -0.25
CXCL12-205ENST00000395794 A0A0U1RQJ8 604 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 MGAT4DA6NG13 374 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 PRR19A6NJB7 356 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 GAPDHSO14556 408 aaPredicted RBP13.48□□□□□ -0.25
CXCL12-205ENST00000395794 TOX3O15405 576 aaPredicted RBP13.48□□□□□ -0.25
CXCL12-205ENST00000395794 CAPN5O15484 640 aaPredicted RBP13.48□□□□□ -0.25
CXCL12-205ENST00000395794 ARHGAP6O43182 974 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 EFSO43281 561 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 NRDCO43847 1150 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 STIP1P31948 543 aaKnown RBP13.48□□□□□ -0.25
CXCL12-205ENST00000395794 LMAN1P49257 510 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 GPR18Q14330 331 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 NFE2L1Q14494 772 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 KRT33BQ14525 404 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 CLCA4Q14CN2 919 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 PLCL1Q15111 1095 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 GPR33Q49SQ1 333 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 KIAA1614Q5VZ46 1190 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 SNX20Q7Z614 316 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 LINC00523Q86TU6 105 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 VASH2Q86V25 355 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 DTX1Q86Y01 620 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 SLC35B2Q8TB61 432 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 JPH3Q8WXH2 748 aaPredicted RBP13.48□□□□□ -0.25
CXCL12-205ENST00000395794 C9orf72Q96LT7 481 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 COPS8Q99627 209 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 FBXO8Q9NRD0 319 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 ACSL5Q9ULC5 683 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 PSMD13Q9UNM6 376 aa13.48□□□□□ -0.25
CXCL12-205ENST00000395794 R3HDM2Q9Y2K5 976 aaKnown RBP13.48□□□□□ -0.25
CXCL12-205ENST00000395794 MN1Q10571 1320 aaPredicted RBP13.47□□□□□ -0.25
CXCL12-205ENST00000395794 E7EVH7 732 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 POLR1CO15160 346 aaPredicted RBP13.47□□□□□ -0.25
CXCL12-205ENST00000395794 METTL18O95568 372 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 ANKRD34CP0C6C1 535 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 SLC35G4P0C7Q5 338 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 TPH1P17752 444 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 CAPZBP47756 277 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 ZNF140P52738 457 aaPredicted RBP13.47□□□□□ -0.25
CXCL12-205ENST00000395794 GFERP55789 205 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 FOXM1Q08050 763 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 SEPT6Q14141 434 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 GSE1Q14687 1217 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 RPS6KA1Q15418 735 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 RPE65Q16518 533 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 KIF26BQ2KJY2 2108 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 METRNLQ641Q3 311 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 DENND5AQ6IQ26 1287 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 IRGCQ6NXR0 463 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 CYB5D1Q6P9G0 228 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 ZNF449Q6P9G9 518 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 TAS2R42Q7RTR8 314 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 CACNA2D3Q8IZS8 1091 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 NXPE1Q8N323 547 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 TAB3Q8N5C8 712 aaPredicted RBP13.47□□□□□ -0.25
CXCL12-205ENST00000395794 BMPERQ8N8U9 685 aa13.47□□□□□ -0.25
CXCL12-205ENST00000395794 DNAAF3Q8N9W5 541 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms