RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 NKX2-8O15522 239 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 POP7O75817 140 aaKnown RBP17.68■□□□□ 0.42
CXCL12-204ENST00000395793 AMD1P17707 334 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 CTNNA2P26232 953 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 PTPN7P35236 360 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 GEMP55040 296 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 COPS2P61201 443 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 MSLNQ13421 630 aaPredicted RBP17.68■□□□□ 0.42
CXCL12-204ENST00000395793 NFE2L1Q14494 772 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 LDLRAP1Q5SW96 308 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 TMEM220Q6QAJ8 160 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 RANBP10Q6VN20 620 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 AMZ2Q86W34 360 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 BEND7Q8N7W2 519 aaPredicted RBP17.68■□□□□ 0.42
CXCL12-204ENST00000395793 ACRBPQ8NEB7 543 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 BRSK1Q8TDC3 778 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 ALG3Q92685 438 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 CXorf40BQ96DE9 158 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 SLC45A3Q96JT2 553 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 PANX2Q96RD6 677 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 ZPBPQ9BS86 351 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 OSBPL8Q9BZF1 889 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 FKBPLQ9UIM3 349 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 PKP3Q9Y446 797 aa17.68■□□□□ 0.42
CXCL12-204ENST00000395793 MACROD2A1Z1Q3 448 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 PRAMEF1O95521 474 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 VCLP18206 1134 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 MAP4P27816 1152 aaKnown RBP17.67■□□□□ 0.42
CXCL12-204ENST00000395793 PBLDP30039 288 aaPredicted RBP17.67■□□□□ 0.42
CXCL12-204ENST00000395793 TNNT3P45378 269 aaPredicted RBP17.67■□□□□ 0.42
CXCL12-204ENST00000395793 XIAPP98170 497 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 FOXM1Q08050 763 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 ITGA9Q13797 1035 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 RPE65Q16518 533 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 ANKRD20A2Q5SQ80 823 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 ANKRD20A1Q5TYW2 823 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 ANKRD20A3Q5VUR7 823 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 FAM92BQ6ZTR7 304 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 DET1Q7L5Y6 550 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 PRICKLE2Q7Z3G6 844 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 PRSS42Q7Z5A4 293 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 LRRC57Q8N9N7 239 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 TTC25Q96NG3 672 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 RBSNQ9H1K0 784 aa17.67■□□□□ 0.42
CXCL12-204ENST00000395793 ZNF768Q9H5H4 540 aaKnown RBP17.67■□□□□ 0.42
CXCL12-204ENST00000395793 GPN2Q9H9Y4 310 aaPredicted RBP17.67■□□□□ 0.42
CXCL12-204ENST00000395793 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.67■□□□□ 0.42
CXCL12-204ENST00000395793 ASH1LQ9NR48 2969 aaKnown RBP17.67■□□□□ 0.42
CXCL12-204ENST00000395793 FLNBO75369 2602 aaKnown RBP17.67■□□□□ 0.42
CXCL12-204ENST00000395793 GRID2IPA4D2P6 1211 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 ZNF891A8MT65 544 aaPredicted RBP17.66■□□□□ 0.42
CXCL12-204ENST00000395793 STX7O15400 261 aaKnown RBP17.66■□□□□ 0.42
CXCL12-204ENST00000395793 KCNN4O15554 427 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 SGTAO43765 313 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 ANXA9O76027 345 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 RBP3P10745 1247 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 PYGMP11217 842 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 F8A1P23610 371 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 STAT5AP42229 794 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 EIF3EP60228 445 aaKnown RBP17.66■□□□□ 0.42
CXCL12-204ENST00000395793 ABHD18Q0P651 414 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 TAF1AQ15573 450 aaPredicted RBP17.66■□□□□ 0.42
CXCL12-204ENST00000395793 FNBP1LQ5T0N5 605 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 CCDC181Q5TID7 509 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 ITPRIPL1Q6GPH6 555 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 DENND5AQ6IQ26 1287 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 DUS1LQ6P1R4 473 aaKnown RBP17.66■□□□□ 0.42
CXCL12-204ENST00000395793 BORAQ6PGQ7 559 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 CDKL3Q8IVW4 592 aaPredicted RBP17.66■□□□□ 0.42
CXCL12-204ENST00000395793 RBM12BQ8IXT5 1001 aaKnown RBP17.66■□□□□ 0.42
CXCL12-204ENST00000395793 OR4K2Q8NGD2 314 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 OR13C4Q8NGS5 318 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 CCDC110Q8TBZ0 833 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 ZNF398Q8TD17 642 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 KLHL6Q8WZ60 621 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 MRFAP1L1Q96HT8 127 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 OR6C1Q96RD1 312 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 TRIM4Q9C037 500 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 ZCCHC2Q9C0B9 1178 aaKnown RBP17.66■□□□□ 0.42
CXCL12-204ENST00000395793 LUC7LQ9NQ29 371 aaKnown RBP17.66■□□□□ 0.42
CXCL12-204ENST00000395793 GEMIN8Q9NWZ8 242 aaKnown RBP17.66■□□□□ 0.42
CXCL12-204ENST00000395793 EPHA6Q9UF33 1036 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 EFR3BQ9Y2G0 817 aa17.66■□□□□ 0.42
CXCL12-204ENST00000395793 MRPS18BQ9Y676 258 aaKnown RBP17.66■□□□□ 0.42
CXCL12-204ENST00000395793 CFAP20Q9Y6A4 193 aaKnown RBP17.66■□□□□ 0.42
CXCL12-204ENST00000395793 A0A0U1RQJ8 604 aa17.65■□□□□ 0.42
CXCL12-204ENST00000395793 BTNL10A8MVZ5 291 aa17.65■□□□□ 0.42
CXCL12-204ENST00000395793 TOX3O15405 576 aaPredicted RBP17.65■□□□□ 0.42
CXCL12-204ENST00000395793 KCNJ13O60928 360 aa17.65■□□□□ 0.42
CXCL12-204ENST00000395793 PPFIA2O75334 1257 aa17.65■□□□□ 0.42
CXCL12-204ENST00000395793 RASSF9O75901 435 aa17.65■□□□□ 0.42
CXCL12-204ENST00000395793 PRKAR1AP10644 381 aa17.65■□□□□ 0.42
CXCL12-204ENST00000395793 LPOP22079 712 aaPredicted RBP17.65■□□□□ 0.42
CXCL12-204ENST00000395793 OAS2P29728 719 aaKnown RBP17.65■□□□□ 0.42
CXCL12-204ENST00000395793 HALP42357 657 aa17.65■□□□□ 0.42
CXCL12-204ENST00000395793 POLE2P56282 527 aa17.65■□□□□ 0.42
CXCL12-204ENST00000395793 ATP1A1-AS1Q5TC04 95 aa17.65■□□□□ 0.42
CXCL12-204ENST00000395793 CACHD1Q5VU97 1274 aa17.65■□□□□ 0.42
CXCL12-204ENST00000395793 IRGCQ6NXR0 463 aa17.65■□□□□ 0.42
CXCL12-204ENST00000395793 TMTC1Q8IUR5 882 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms