RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 HLA-DQA1Q5Y7H0 255 aa17.03■□□□□ 0.32
SIN3A-203ENST00000394949 ESRP1Q6NXG1 681 aaKnown RBP17.03■□□□□ 0.32
SIN3A-203ENST00000394949 RHBDF2Q6PJF5 856 aa17.03■□□□□ 0.32
SIN3A-203ENST00000394949 LBX2Q6XYB7 198 aa17.03■□□□□ 0.32
SIN3A-203ENST00000394949 CPNE8Q86YQ8 564 aa17.03■□□□□ 0.32
SIN3A-203ENST00000394949 SPPL2BQ8TCT7 592 aa17.03■□□□□ 0.32
SIN3A-203ENST00000394949 OR52B2Q96RD2 323 aa17.03■□□□□ 0.32
SIN3A-203ENST00000394949 ANKRA2Q9H9E1 313 aa17.03■□□□□ 0.32
SIN3A-203ENST00000394949 ABCB9Q9NP78 766 aa17.03■□□□□ 0.32
SIN3A-203ENST00000394949 DNAJC11Q9NVH1 559 aa17.03■□□□□ 0.32
SIN3A-203ENST00000394949 MCUBQ9NWR8 336 aa17.03■□□□□ 0.32
SIN3A-203ENST00000394949 ACTR3BQ9P1U1 418 aa17.03■□□□□ 0.32
SIN3A-203ENST00000394949 CNTN3Q9P232 1028 aa17.03■□□□□ 0.32
SIN3A-203ENST00000394949 ARPC2O15144 300 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 CYP11A1P05108 521 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 ITIH1P19827 911 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 IMPDH1P20839 514 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 PRKCHP24723 683 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 TLX1P31314 330 aaPredicted RBP17.02■□□□□ 0.32
SIN3A-203ENST00000394949 ERVK-8P63133 956 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 FAM110CQ1W6H9 321 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 RASAL3Q86YV0 1011 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 HID1Q8IV36 788 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 MARVELD2Q8N4S9 558 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 CLHC1Q8NHS4 586 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 KLHL5Q96PQ7 755 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 TRPS1Q9UHF7 1281 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 MRPS23Q9Y3D9 190 aaKnown RBP17.02■□□□□ 0.32
SIN3A-203ENST00000394949 YES1P07947 543 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 SLURP2P0DP57 97 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 RHOQP17081 205 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 AZGP1P25311 298 aaKnown RBP17.02■□□□□ 0.32
SIN3A-203ENST00000394949 OMPP47874 163 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 AP3S2P59780 193 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 SMAD3P84022 425 aaKnown RBP17.02■□□□□ 0.32
SIN3A-203ENST00000394949 SLC9A5Q14940 896 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 DEFB115Q30KQ5 88 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 FBXO43Q4G163 708 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 PITRM1Q5JRX3 1037 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 SULT1C3Q6IMI6 304 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 DHRS7Q9Y394 339 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 SPEF2Q9C093 1822 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 A0A1W2PQ72 361 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 WWP2O00308 870 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 ATF6P18850 670 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 CDH15P55291 814 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 E2F2Q14209 437 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 RUNDC3AQ59EK9 446 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 UBE2R2Q712K3 238 aaPredicted RBP17.02■□□□□ 0.32
SIN3A-203ENST00000394949 OR4K2Q8NGD2 314 aa17.02■□□□□ 0.32
SIN3A-203ENST00000394949 TTYH1Q9H313 450 aaPredicted RBP17.02■□□□□ 0.32
SIN3A-203ENST00000394949 PRKAR2AP13861 404 aaKnown RBP17.02■□□□□ 0.31
SIN3A-203ENST00000394949 TMEM198Q66K66 360 aa17.02■□□□□ 0.31
SIN3A-203ENST00000394949 FIBCD1Q8N539 461 aa17.02■□□□□ 0.31
SIN3A-203ENST00000394949 ZBTB26Q9HCK0 441 aa17.02■□□□□ 0.31
SIN3A-203ENST00000394949 SIRPGQ9P1W8 387 aa17.02■□□□□ 0.31
SIN3A-203ENST00000394949 FZD10Q9ULW2 581 aa17.02■□□□□ 0.31
SIN3A-203ENST00000394949 C1QTNF3-AMACRE9PGA6 284 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 ALDH4A1P30038 563 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 RORCP51449 518 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 IST1P53990 364 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 RHAGQ02094 409 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 ZDHHC20Q5W0Z9 365 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 CHADLQ6NUI6 762 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 ZNF773Q6PK81 442 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 DOK6Q6PKX4 331 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 ZC3H3Q8IXZ2 948 aaKnown RBP17.01■□□□□ 0.31
SIN3A-203ENST00000394949 LRRC58Q96CX6 371 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 ZNF347Q96SE7 839 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 TFB2MQ9H5Q4 396 aaKnown RBP17.01■□□□□ 0.31
SIN3A-203ENST00000394949 BRD9Q9H8M2 597 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 FABP12A6NFH5 140 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 GABRDO14764 452 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 SLC28A2O43868 658 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 TLR5O60602 858 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 SUZ12Q15022 739 aaKnown RBP17.01■□□□□ 0.31
SIN3A-203ENST00000394949 NCCRP1Q6ZVX7 275 aaPredicted RBP17.01■□□□□ 0.31
SIN3A-203ENST00000394949 PEX5LQ8IYB4 626 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 GJD3Q8N144 294 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 CENPSQ8N2Z9 138 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 LPPQ93052 612 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 AZIN2Q96A70 460 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 CRELD1Q96HD1 420 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 BTN2A3PQ96KV6 586 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 TBATAQ96M53 351 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 TCRBV7S3A2A0A539 114 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 IFNGP01579 166 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 ANXA8P13928 327 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 LSAMPQ13449 338 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 DPY19L1Q2PZI1 675 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 ANKRD23Q86SG2 305 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 GPR20Q99678 358 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 GSDMCQ9BYG8 508 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 TM6SF2Q9BZW4 377 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 KCNN2Q9H2S1 579 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 FAM86C2PA6NEL3 165 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 CXorf49A8MYA2 514 aaPredicted RBP17.01■□□□□ 0.31
SIN3A-203ENST00000394949 REM1O75628 298 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 HERVK_113P63132 956 aa17.01■□□□□ 0.31
SIN3A-203ENST00000394949 GTF2H2Q13888 395 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms