RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 A0A1W2PRG6 482 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 MYO1GB0I1T2 1018 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 TPP1O14773 563 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 HDAC3O15379 428 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ICMTO60725 284 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 TMEM63AO94886 807 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 SYN1P17600 705 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 PRDX6P30041 224 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 RPL14P50914 215 aaKnown RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 NRLP54845 237 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ZNF33AQ06730 810 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 MERTKQ12866 999 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 GRM2Q14416 872 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ZNF284Q2VY69 593 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 SYTL3Q4VX76 610 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 C6orf10Q5SRN2 563 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 LHX8Q68G74 356 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ZNF598Q86UK7 904 aaKnown RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 IGFN1Q86VF2 1251 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 CIR1Q86X95 450 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 ANKRD13BQ86YJ7 626 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ZDHHC13Q8IUH4 622 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 HS6ST3Q8IZP7 471 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.63□□□□□ -1.51
RFFL-202ENST00000394597 PNPT1Q8TCS8 783 aaKnown RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 PTCD2Q8WV60 388 aaKnown RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 SMG7Q92540 1137 aaKnown RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 SLC35B4Q969S0 331 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 EXOC2Q96KP1 924 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 FCRL5Q96RD9 977 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 RAD9AQ99638 391 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 TM6SF2Q9BZW4 377 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ATP13A3Q9H7F0 1226 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 CATSPERZQ9NTU4 200 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 SMPD3Q9NY59 655 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 TAS2R13Q9NYV9 303 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 EGFL7Q9UHF1 273 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 TCRBV7S3A2A0A539 114 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 STK25O00506 426 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 KMOO15229 486 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 PDE9AO76083 593 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 CYP2A6P11509 494 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 ZNF7P17097 686 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 IDH3AP50213 366 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 KCNQ1P51787 676 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ABATP80404 500 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 GALNT2Q10471 571 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 NFATC3Q12968 1075 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 GK3PQ14409 553 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 CCNYL2Q5T2Q4 361 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ERAP2Q6P179 960 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 CHST15Q7LFX5 561 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 DEPDC4Q8N2C3 294 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 Q8N9G6 341 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 KCTD14Q9BQ13 255 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 SLC25A23Q9BV35 468 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ROGDIQ9GZN7 287 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 RUBCNLQ9H714 662 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 NMRAL1Q9HBL8 299 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 CHRAC1Q9NRG0 131 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 STOML2Q9UJZ1 356 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 FBXO5Q9UKT4 447 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 OGDHLQ9ULD0 1010 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 RNF112Q9ULX5 631 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 SPATA2Q9UM82 520 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 INSL5Q9Y5Q6 135 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 A0A087X1B8 175 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 CCDC85CA6NKD9 419 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 GRM6O15303 877 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 BUD23O43709 281 aaKnown RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 DYRK3O43781 588 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 MTRF1O75570 445 aaKnown RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 SUPT7LO94864 414 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 MT-CYBP00156 380 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 YES1P07947 543 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 LPOP22079 712 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 SLC7A2P52569 658 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 MAPK12P53778 367 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 NAGLUP54802 743 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 KCNK10P57789 538 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 CYP4F8P98187 520 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 DSC2Q02487 901 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 SCAPQ12770 1279 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 TRAP1Q12931 704 aaKnown RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 NFYCQ13952 458 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 CAPRIN1Q14444 709 aaKnown RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 KCNJ11Q14654 390 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 RAB6CQ53S08 254 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 MS4A13Q5J8X5 152 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 PDZK1Q5T2W1 519 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 RTN4RL1Q86UN2 441 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 PHC2Q8IXK0 858 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ARFGAP1Q8N6T3 406 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 PIK3R3Q92569 461 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 HDAC10Q969S8 669 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 NSMCE2Q96MF7 247 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ZBTB18Q99592 522 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 PRRG3Q9BZD7 231 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 RAB6CQ9H0N0 254 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms