RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 ALDH16A1Q8IZ83 802 aa12.15□□□□□ -0.46
RFC5-201ENST00000392542 SFRP1Q8N474 314 aa12.15□□□□□ -0.46
RFC5-201ENST00000392542 FIBCD1Q8N539 461 aa12.15□□□□□ -0.46
RFC5-201ENST00000392542 DCBLD1Q8N8Z6 715 aa12.15□□□□□ -0.46
RFC5-201ENST00000392542 HM13Q8TCT9 377 aa12.15□□□□□ -0.46
RFC5-201ENST00000392542 PROKR1Q8TCW9 393 aa12.15□□□□□ -0.46
RFC5-201ENST00000392542 NANOGQ9H9S0 305 aa12.15□□□□□ -0.46
RFC5-201ENST00000392542 C8orf4Q9NR00 106 aa12.15□□□□□ -0.46
RFC5-201ENST00000392542 HEBP1Q9NRV9 189 aa12.15□□□□□ -0.46
RFC5-201ENST00000392542 INTS7Q9NVH2 962 aaKnown RBP12.15□□□□□ -0.46
RFC5-201ENST00000392542 STOML2Q9UJZ1 356 aa12.15□□□□□ -0.46
RFC5-201ENST00000392542 FCF1Q9Y324 198 aaKnown RBP12.15□□□□□ -0.46
RFC5-201ENST00000392542 TNPO3Q9Y5L0 923 aaKnown RBP12.15□□□□□ -0.46
RFC5-201ENST00000392542 CEPT1Q9Y6K0 416 aa12.15□□□□□ -0.46
RFC5-201ENST00000392542 PLXNA4Q9HCM2 1894 aa12.15□□□□□ -0.46
RFC5-201ENST00000392542 KANSL1LA0AUZ9 987 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 DYTNA2CJ06 578 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 PRAMEF12O95522 483 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 CAPN1P07384 714 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 ENO2P09104 434 aaPredicted RBP12.15□□□□□ -0.47
RFC5-201ENST00000392542 NCK1P16333 377 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 HTR1EP28566 365 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 CASP2P42575 452 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 HTR6P50406 440 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 TUBA4AP68366 448 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 PRKG2Q13237 762 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 AASDHQ4L235 1098 aaPredicted RBP12.15□□□□□ -0.47
RFC5-201ENST00000392542 CERS6Q6ZMG9 384 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 LYSMD3Q7Z3D4 306 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 GOLGA7Q7Z5G4 137 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 DPP10Q8N608 796 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 FAM47BQ8NA70 645 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 PAPD5Q8NDF8 572 aaKnown RBP12.15□□□□□ -0.47
RFC5-201ENST00000392542 METTL6Q8TCB7 284 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 RAET1EQ8TD07 263 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 EID2BQ96D98 161 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 TMEM74Q96NL1 305 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 ADI1Q9BV57 179 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 VN1R3Q9BXE9 311 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 CLK4Q9HAZ1 481 aaKnown RBP12.15□□□□□ -0.47
RFC5-201ENST00000392542 MAGEE1Q9HCI5 957 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 SMOXQ9NWM0 555 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 SLAMF8Q9P0V8 285 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 ANAPC2Q9UJX6 822 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 SLC8A2Q9UPR5 921 aa12.15□□□□□ -0.47
RFC5-201ENST00000392542 BRCA2P51587 3418 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 H3BSA7 217 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 S100BP04271 92 aaPredicted RBP12.14□□□□□ -0.47
RFC5-201ENST00000392542 CTPS1P17812 591 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 MYF6P23409 242 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 RFC2P35250 354 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 HMGCLP35914 325 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 TAF12Q16514 161 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 FXNQ16595 210 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 C18orf21Q32NC0 220 aaPredicted RBP12.14□□□□□ -0.47
RFC5-201ENST00000392542 TMTC4Q5T4D3 741 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 ATXN7L2Q5T6C5 722 aaPredicted RBP12.14□□□□□ -0.47
RFC5-201ENST00000392542 IL27RAQ6UWB1 636 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 SBSNQ6UWP8 590 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 CD99L2Q8TCZ2 262 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 TRMT2BQ96GJ1 504 aaKnown RBP12.14□□□□□ -0.47
RFC5-201ENST00000392542 MYO19Q96H55 970 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 CLSTN3Q9BQT9 956 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 FEM1AQ9BSK4 669 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 HSFX1Q9UBD0 423 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 YIPF1Q9Y548 306 aa12.14□□□□□ -0.47
RFC5-201ENST00000392542 RNF103-CHMP3A0A140T963 221 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 OR7A17O14581 309 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 ACOX3O15254 700 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 RASAL1O95294 804 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 LATS1O95835 1130 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 C7P10643 843 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 ZNF7P17097 686 aaPredicted RBP12.13□□□□□ -0.47
RFC5-201ENST00000392542 RPS3P23396 243 aaKnown RBP eCLIP12.13□□□□□ -0.47
RFC5-201ENST00000392542 ARL1P40616 181 aaPredicted RBP12.13□□□□□ -0.47
RFC5-201ENST00000392542 MERTKQ12866 999 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 GTF2H2Q13888 395 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 ARMC12Q5T9G4 340 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 PTRHD1Q6GMV3 140 aaKnown RBP12.13□□□□□ -0.47
RFC5-201ENST00000392542 GTF2H2CQ6P1K8 395 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 SLC2A7Q6PXP3 512 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 PRR23BQ6ZRT6 265 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 FAM43BQ6ZT52 329 aaPredicted RBP12.13□□□□□ -0.47
RFC5-201ENST00000392542 SERPINA9Q86WD7 417 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 PROSER1Q86XN7 944 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 HID1Q8IV36 788 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 FAM126BQ8IXS8 530 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 RNF168Q8IYW5 571 aaPredicted RBP12.13□□□□□ -0.47
RFC5-201ENST00000392542 TBC1D21Q8IYX1 336 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 PDPRQ8NCN5 879 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 OR4F6Q8NGB9 312 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 GRIN3AQ8TCU5 1115 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 PXYLP1Q8TE99 480 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 ISG20Q96AZ6 181 aaKnown RBP12.13□□□□□ -0.47
RFC5-201ENST00000392542 SMPD4Q9NXE4 827 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 VPS51Q9UID3 782 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 TSR3Q9UJK0 312 aaKnown RBP12.13□□□□□ -0.47
RFC5-201ENST00000392542 OAZ3Q9UMX2 235 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 OR51B4Q9Y5P0 310 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 SCN5AQ14524 2016 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms