RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 ZDHHC20Q5W0Z9 365 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 ARHGAP17Q68EM7 881 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 RSRC2Q7L4I2 434 aaKnown RBP3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 DGLUCYQ7Z3D6 616 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 GALNT5Q7Z7M9 940 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 ARID3BQ8IVW6 561 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 TEX11Q8IYF3 940 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 STPG4Q8N801 248 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 TEX19Q8NA77 164 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 TRIM58Q8NG06 486 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 SLX1AQ9BQ83 275 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 PLK3Q9H4B4 646 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 RAD21L1Q9H4I0 556 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 APOBEC3GQ9HC16 384 aaKnown RBP3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 SCRT2Q9NQ03 307 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 OGFRQ9NZT2 677 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 ZNF624Q9P2J8 865 aaPredicted RBP3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 B3GALT5Q9Y2C3 310 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 CMAHPQ9Y471 501 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 JRKLQ9Y4A0 524 aa3.39□□□□□ -1.87
SNORA40.3-201ENST00000390964 ZG16O60844 167 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 GH2P01242 217 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 APOHP02749 345 aaPredicted RBP3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 GABRB1P18505 474 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 TNFAIP3P21580 790 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 PON1P27169 355 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 TM4SF1P30408 202 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 ATP12AP54707 1039 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 CD81P60033 236 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 ZNF876PQ49A33 203 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 ZC2HC1CQ53FD0 456 aaPredicted RBP3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 NDUFAF5Q5TEU4 345 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 TMEM198Q66K66 360 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 TRPT1Q86TN4 253 aaKnown RBP3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 PTOV1Q86YD1 416 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 WDTC1Q8N5D0 677 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 ZNF473Q8WTR7 871 aaKnown RBP3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 CCDC34Q96HJ3 373 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 GAD1Q99259 594 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 LITAFQ99732 161 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 NAP1L4Q99733 375 aaKnown RBP3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 BARHL1Q9BZE3 327 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 ADPRHL2Q9NX46 363 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 DDX43Q9NXZ2 648 aaKnown RBP3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 FBXL17Q9UF56 701 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 TSPYL4Q9UJ04 414 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 EXO1Q9UQ84 846 aaKnown RBP3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 ITIH6Q6UXX5 1313 aa3.38□□□□□ -1.87
SNORA40.3-201ENST00000390964 TEX13DA0A0J9YY54 714 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 CDRT15L2A8MXV6 281 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 TMEM189-UBE2V1I3L0A0 370 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 LDLRP01130 860 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 NR3C1P04150 777 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 KRT19P08727 400 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 PATE4P0C8F1 98 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 RNF224P0DH78 156 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 ERVK-10P10266 1014 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 MSH3P20585 1137 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 HOXC8P31273 242 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 MMP15P51511 669 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 DRG2P55039 364 aaKnown RBP3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 CDH8P55286 799 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 HILS1P60008 231 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 PMP22Q01453 160 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 AIMP2Q13155 320 aaKnown RBP3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 UBE2V1Q13404 147 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 KIAA0930Q6ICG6 404 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 ARHGAP11AQ6P4F7 1023 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 RBMS3Q6XE24 437 aaKnown RBP3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 ANO5Q75V66 913 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 CHST9Q7L1S5 443 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 MAATS1Q7Z4T9 603 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 GALNT13Q8IUC8 556 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 APLFQ8IW19 511 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 MCEMP1Q8IX19 187 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 ADGRF2Q8IZF7 708 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 ANKRD52Q8NB46 1076 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 FCAMRQ8WWV6 532 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 TMEM190Q8WZ59 177 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 PRMT6Q96LA8 375 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 SLC22A12Q96S37 553 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 SEMA6AQ9H2E6 1030 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 ZHX3Q9H4I2 956 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 DENND2DQ9H6A0 471 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 SEPT11Q9NVA2 429 aaKnown RBP3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 SLC38A7Q9NVC3 462 aa3.37□□□□□ -1.87
SNORA40.3-201ENST00000390964 KIAA1210Q9ULL0 1709 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 SMCHD1A6NHR9 2005 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 A0A0G2JLW4 131 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 PLK4O00444 970 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 NDUFS4O43181 175 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 CIDEAO60543 219 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 TPPPO94811 219 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 BAIAP3O94812 1187 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 TSHBP01222 138 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 RB1P06400 928 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 PRSS56P0CW18 603 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 IGHV4-38-2P0DP08 117 aa3.36□□□□□ -1.87
SNORA40.3-201ENST00000390964 CHRNB4P30926 498 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms