RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 OR56B1Q8NGI3 324 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 OR52B4Q8NGK2 314 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 SUN3Q8TAQ9 357 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 ZNF596Q8TC21 504 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 DDX54Q8TDD1 881 aaKnown RBP3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 CYB5D2Q8WUJ1 264 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 ROBO4Q8WZ75 1007 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 MRGPRFQ96AM1 343 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 OTUB2Q96DC9 234 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 ERLEC1Q96DZ1 483 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 DAZAP1Q96EP5 407 aaKnown RBP3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 TAAR6Q96RI8 345 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 MED15Q96RN5 788 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 OSBPL9Q96SU4 736 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 PAFAH2Q99487 392 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 SRSF8Q9BRL6 282 aaKnown RBP3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 C17orf80Q9BSJ5 609 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 ALKBH7Q9BT30 221 aaPredicted RBP3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 INPP5KQ9BT40 448 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 MCMBPQ9BTE3 642 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 ADI1Q9BV57 179 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 PARD6GQ9BYG4 376 aaPredicted RBP3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 CPEB1Q9BZB8 566 aaKnown RBP3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 GRIP2Q9C0E4 1043 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 MFFQ9GZY8 342 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 KIF9Q9HAQ2 790 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 TDP1Q9NUW8 608 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 OLAHQ9NV23 265 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 THAP1Q9NVV9 213 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 ERVK13-1Q9NX77 482 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 BTG4Q9NY30 223 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 PDP1Q9P0J1 537 aaPredicted RBP3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 PIM2Q9P1W9 311 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 SRRDQ9UH36 339 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 CIDEBQ9UHD4 219 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 NARFQ9UHQ1 456 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 PRSS50Q9UI38 385 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 ENPP5Q9UJA9 477 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 MID2Q9UJV3 735 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 CDH9Q9ULB4 789 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 PACSIN2Q9UNF0 486 aaPredicted RBP3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 NEU2Q9Y3R4 380 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 CDY2AQ9Y6F7 541 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 ASTN2O75129 1339 aaPredicted RBP3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 CDHR2Q9BYE9 1310 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 FHOD3Q2V2M9 1422 aa3.35□□□□□ -1.87
TRAJ17-201ENST00000390520 EDDM13A0A1B0GTR0 161 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 A0A1W2PPV4 95 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 A0A1W2PQ72 361 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 BCLAF3A2AJT9 711 aaKnown RBP3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 C17orf102A2RUQ5 167 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 PRAMEF27A3QJZ7 478 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 SMCO2A6NFE2 343 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 TCAF2A6NFQ2 919 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 WIPF3A6NGB9 483 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 NPIPB13A6NJU9 1138 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 OR2AG2A6NM03 316 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 TRPC5OSA6NMA1 111 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 YDJCA8MPS7 323 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 ERVV-1B6SEH8 477 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 NPIPB4C9JG80 1138 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 E7ENQ6 273 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 H0YJX3 145 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 TLR4O00206 839 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 MEIS1O00470 390 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 NFIBO00712 420 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 MAN2B1O00754 1011 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 KCNK3O14649 394 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 ITGB1BP1O14713 200 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 AIM2O14862 343 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 LDLRAD4O15165 306 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 ST8SIA3O43173 380 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 SEC14L5O43304 696 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 DCXO43602 365 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 BNIP3LO60238 219 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 STX10O60499 249 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 JAK2O60674 1132 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 VPS4BO75351 444 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 NME6O75414 186 aaPredicted RBP3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 RNF8O76064 485 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 FARP2O94887 1054 aaPredicted RBP3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 SUN1O94901 812 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 ARHGEF15O94989 841 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 ASS1P00966 412 aaKnown RBP3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 GH1P01241 217 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 SERPINA6P08185 405 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 RPS17P08708 135 aaKnown RBP3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 KRT7P08729 469 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 STAG3L1P0CL83 205 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 CCDC166P0CW27 439 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 PLS3P13797 630 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 KRT15P19012 456 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 RAB4AP20338 218 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 ACO1P21399 889 aaKnown RBP3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 CCNOP22674 350 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 PRKCHP24723 683 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 PSMB6P28072 239 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 PRDX5P30044 214 aa3.34□□□□□ -1.87
TRAJ17-201ENST00000390520 PKLRP30613 574 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms