RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 KRTAP19-6Q3LI70 58 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 COX19Q49B96 90 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NHSL2Q5HYW2 709 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TTC38Q5R3I4 469 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 UTP14CQ5TAP6 766 aaKnown RBP-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 LIPMQ5VYY2 423 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SFRP4Q6FHJ7 346 aaPredicted RBP-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 JADE1Q6IE81 842 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NFRKBQ6P4R8 1299 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 POMZP3Q6PJE2 187 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 KCNT2Q6UVM3 1135 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ASCL5Q7RTU5 278 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ATG9AQ7Z3C6 839 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CAND1Q86VP6 1230 aaKnown RBP-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ZFAND4Q86XD8 727 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 FAM90A1Q86YD7 464 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 VSIG10Q8N0Z9 540 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SLC25A41Q8N5S1 370 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TMEM178AQ8NBL3 297 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 BVESQ8NE79 360 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 GANCQ8TET4 914 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ZNF480Q8WV37 535 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ZFPM2Q8WW38 1151 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PIGTQ969N2 578 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 FAF2Q96CS3 445 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TTC1Q99614 292 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SMOQ99835 787 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CCDC28BQ9BUN5 200 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TTLL2Q9BWV7 592 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TDRD1Q9BXT4 1180 aaKnown RBP-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 LDHAL6BQ9BYZ2 381 aaPredicted RBP-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TRIM2Q9C040 744 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 JPT2Q9H910 190 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 KBTBD4Q9NVX7 518 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 FAM206AQ9NX38 181 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SEPT3Q9UH03 358 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 GRID1Q9ULK0 1009 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TLR6Q9Y2C9 796 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 DGKBQ9Y6T7 804 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CRB1P82279 1406 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 DNAH9Q9NYC9 4486 aa-2.36□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SPTA1P02549 2419 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 IL16Q14005 1332 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 WASHC2CQ9Y4E1 1318 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 INTS1Q8N201 2190 aaKnown RBP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 IGKV1-12A0A0C4DH73 117 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 FRG2CA6NGY1 282 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MINDY4BA8MYZ0 360 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TNPO2O14787 897 aaKnown RBP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TIMM23O14925 209 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 OGTO15294 1046 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 KALRNO60229 2985 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PRAMEF4O60810 478 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SHOX2O60902 331 aaPredicted RBP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CDRT1O95170 752 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SGPL1O95470 568 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SEC24AO95486 1093 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 IGKV1D-12P01611 117 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MBPP02686 304 aaPredicted RBP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ZFYP08048 801 aaPredicted RBP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 UBTFP17480 764 aaKnown RBP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 USP8P40818 1118 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SERPINB8P50452 374 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SUMO2P61956 95 aaKnown RBP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ACTA2P62736 377 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ACTC1P68032 377 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TMPRSS15P98073 1019 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 FOXM1Q08050 763 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 MGAT5Q09328 741 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PRKAA1Q13131 559 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 TARDBPQ13148 414 aaKnown RBP eCLIP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 GSG1Q2KHT4 349 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SPOUT1Q5T280 376 aaKnown RBP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PRAMEF9Q5VWM5 478 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 FBXW10Q5XX13 1052 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 LEMD1Q68G75 181 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 KRTAP26-1Q6PEX3 210 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ZNF474Q6S9Z5 364 aaPredicted RBP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 FAM180AQ6UWF9 173 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 HAUS6Q7Z4H7 955 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 RABEPKQ7Z6M1 372 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ADGRG6Q86SQ4 1221 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 C14orf178Q8N769 122 aaPredicted RBP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 C4orf32Q8N8J7 132 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ANKRD42Q8N9B4 389 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 C20orf203Q8NBC4 194 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 C3orf20Q8ND61 904 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 CATSPER1Q8NEC5 780 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 DNAAF1Q8NEP3 725 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 NLGN4YQ8NFZ3 816 aaPredicted RBP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 OR7D4Q8NG98 312 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PLBD2Q8NHP8 589 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 FBXO27Q8NI29 283 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SLC35F5Q8WV83 523 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 STON2Q8WXE9 905 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 PLAC4Q8WY50 150 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 ABTB1Q969K4 478 aaPredicted RBP-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 SHANK2-AS3Q9BTD1 123 aa-2.37□□□□□ -2.79
RNU6-1340P-201ENST00000384438 FUCA2Q9BTY2 467 aa-2.37□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms