RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 ARNTP27540 789 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 OXTRP30559 389 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 SLC6A4P31645 630 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 PPP3CCP48454 512 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 OCA2Q04671 838 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 GRIK2Q13002 908 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 PITRM1Q5JRX3 1037 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 TMEM53Q6P2H8 277 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 GALNT18Q6P9A2 607 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 CYHR1Q6ZMK1 362 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 NEK10Q6ZWH5 1172 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 CPNE9Q8IYJ1 553 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 GPR65Q8IYL9 337 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 SPATA6LQ8N4H0 392 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 MAGEE2Q8TD90 523 aaPredicted RBP8.85□□□□□ -0.99
GPNMB-202ENST00000381990 TRIM43Q96BQ3 446 aaPredicted RBP8.85□□□□□ -0.99
GPNMB-202ENST00000381990 TAMM41Q96BW9 452 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 EFHD2Q96C19 240 aaPredicted RBP8.85□□□□□ -0.99
GPNMB-202ENST00000381990 ZNF641Q96N77 438 aaPredicted RBP8.85□□□□□ -0.99
GPNMB-202ENST00000381990 KLHL5Q96PQ7 755 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 PSD2Q9BQI7 771 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 NAA50Q9GZZ1 169 aaKnown RBP8.85□□□□□ -0.99
GPNMB-202ENST00000381990 ALG2Q9H553 416 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 NANOGQ9H9S0 305 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 CYP4F12Q9HCS2 524 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 TNFRSF12AQ9NP84 129 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 SDR39U1Q9NRG7 319 aaPredicted RBP8.85□□□□□ -0.99
GPNMB-202ENST00000381990 TREX1Q9NSU2 369 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 EGFL7Q9UHF1 273 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 MAFFQ9ULX9 164 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 VWA7Q9Y334 891 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 PCDHA9Q9Y5H5 950 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 CHD5Q8TDI0 1954 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 MIA3Q5JRA6 1907 aa8.85□□□□□ -0.99
GPNMB-202ENST00000381990 PRAMEF11O60813 436 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 VPS4BO75351 444 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 CLIC3O95833 236 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 EEF1B2P24534 225 aaKnown RBP8.84□□□□□ -0.99
GPNMB-202ENST00000381990 PPM1AP35813 382 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 ACVRL1P37023 503 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 MRPL19P49406 292 aaKnown RBP8.84□□□□□ -0.99
GPNMB-202ENST00000381990 EIF2B2P49770 351 aaKnown RBP8.84□□□□□ -0.99
GPNMB-202ENST00000381990 PGGT1BP53609 377 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 EPS8Q12929 822 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 ITGADQ13349 1161 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 PLD1Q13393 1074 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 POU6F1Q14863 301 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 ESRP1Q6NXG1 681 aaKnown RBP8.84□□□□□ -0.99
GPNMB-202ENST00000381990 CCDC80Q76M96 950 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 IGFN1Q86VF2 1251 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 DENND1CQ8IV53 801 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 TCEAL8Q8IYN2 117 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 TMEM199Q8N511 208 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 FAM110BQ8TC76 370 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 S100ZQ8WXG8 99 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 BCL7BQ9BQE9 202 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 MAGEH1Q9H213 219 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 AKTIPQ9H8T0 292 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 CMTM6Q9NX76 183 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 CORINQ9Y5Q5 1042 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 ANAPC1Q9H1A4 1944 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 TCRBV5S2A0A599 114 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 J3QRK9 145 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 UBXN8O00124 270 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 INPP4BO15327 924 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 STC2O76061 302 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 KCNA5P22460 613 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 LEPRP48357 1165 aaKnown RBP8.84□□□□□ -0.99
GPNMB-202ENST00000381990 CDH4P55283 916 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 GABARAPL2P60520 117 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 HERVK_113P63132 956 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 ITKQ08881 620 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 SKIV2LQ15477 1246 aaKnown RBP8.84□□□□□ -0.99
GPNMB-202ENST00000381990 CRY1Q16526 586 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 FXNQ16595 210 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 UGT3A2Q3SY77 523 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 ZNF678Q5SXM1 525 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 GTF2IRD2BQ6EKJ0 949 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 NEPROQ6NW34 567 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 GTF2IRD2Q86UP8 949 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 PROSER1Q86XN7 944 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 CFAP52Q8N1V2 620 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 FBXL8Q96CD0 374 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 ZNF599Q96NL3 588 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 YME1L1Q96TA2 773 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 ERVK-6Q9BXR3 956 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 ING2Q9H160 280 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 FANCEQ9HB96 536 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 ATP13A1Q9HD20 1204 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 HPS4Q9NQG7 708 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.84□□□□□ -0.99
GPNMB-202ENST00000381990 MRPL17Q9NRX2 175 aaKnown RBP8.84□□□□□ -0.99
GPNMB-202ENST00000381990 KIAA1522Q9P206 1035 aaPredicted RBP8.84□□□□□ -0.99
GPNMB-202ENST00000381990 UXTQ9UBK9 157 aaPredicted RBP8.84□□□□□ -0.99
GPNMB-202ENST00000381990 CPQQ9Y646 472 aa8.84□□□□□ -0.99
GPNMB-202ENST00000381990 KRBA1A5PL33 1030 aa8.84□□□□□ -1
GPNMB-202ENST00000381990 UBFD1O14562 309 aaKnown RBP8.84□□□□□ -1
GPNMB-202ENST00000381990 SUPT7LO94864 414 aa8.84□□□□□ -1
GPNMB-202ENST00000381990 SNAP29O95721 258 aa8.84□□□□□ -1
GPNMB-202ENST00000381990 HPRP00739 348 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms