RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ZSWIM3Q96MP5 696 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 PPP1R2P1Q96PQ5 205 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 ACOX2Q99424 681 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 DDX50Q9BQ39 737 aaKnown RBP10.7□□□□□ -0.7
NEDD9-201ENST00000379433 ADA2Q9NZK5 511 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 TRMT6Q9UJA5 497 aaKnown RBP10.7□□□□□ -0.7
NEDD9-201ENST00000379433 MID2Q9UJV3 735 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 AK5Q9Y6K8 562 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 A0A087X1B8 175 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 ANTXRLA6NF34 631 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 MATN2O00339 956 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 ZNF195O14628 629 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 ARHGEF15O94989 841 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 CYBBP04839 570 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 COX4I1P13073 169 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 EEF1DP29692 281 aaKnown RBP10.69□□□□□ -0.7
NEDD9-201ENST00000379433 ART3Q13508 389 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 COL9A2Q14055 689 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-201ENST00000379433 C6orf163Q5TEZ5 329 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 EPGNQ6UW88 154 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 SETD3Q86TU7 594 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-201ENST00000379433 MYO19Q96H55 970 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 PRPF18Q99633 342 aaKnown RBP10.69□□□□□ -0.7
NEDD9-201ENST00000379433 CEP44Q9C0F1 390 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 NOP53Q9NZM5 478 aaKnown RBP10.69□□□□□ -0.7
NEDD9-201ENST00000379433 ZMYM5Q9UJ78 669 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 CRLS1Q9UJA2 301 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 INTS6Q9UL03 887 aaKnown RBP10.69□□□□□ -0.7
NEDD9-201ENST00000379433 PATJQ8NI35 1801 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 UBFD1O14562 309 aaKnown RBP10.69□□□□□ -0.7
NEDD9-201ENST00000379433 AXIN1O15169 862 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 APOA4P06727 396 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 ZNF37AP17032 561 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-201ENST00000379433 GDF5P43026 501 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 B2MP61769 119 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 TBL3Q12788 808 aaKnown RBP10.69□□□□□ -0.7
NEDD9-201ENST00000379433 AGKQ53H12 422 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 LY6G5CQ5SRR4 150 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 ZNF648Q5T619 568 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-201ENST00000379433 FRA10AC1Q70Z53 315 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 CCDC116Q8IYX3 515 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 MYRFLQ96LU7 910 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 EGFL8Q99944 293 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 ZFYVE1Q9HBF4 777 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 CUEDC1Q9NWM3 386 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-201ENST00000379433 HACD3Q9P035 362 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 ATXN10Q9UBB4 475 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 TRANK1O15050 2925 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 RASGRP1O95267 797 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 PIK3R1P27986 724 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 VIPR2P41587 438 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 PTDSS1P48651 473 aaKnown RBP10.69□□□□□ -0.7
NEDD9-201ENST00000379433 CHST14Q8NCH0 376 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 NUDT8Q8WV74 236 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 TUBGCP3Q96CW5 907 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 CDRT15Q96T59 188 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 C1orf50Q9BV19 199 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 RNPEPL1Q9HAU8 725 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 SAGE1Q9NXZ1 904 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 TBC1D30Q9Y2I9 924 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 COL4A6Q14031 1691 aa10.69□□□□□ -0.7
NEDD9-201ENST00000379433 GRM6O15303 877 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 SH3BGRLO75368 114 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 RHOP08100 348 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 RBP1P09455 135 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 CTSAP10619 480 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 ZNF3P17036 446 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 CCND1P24385 295 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 PPM1AP35813 382 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 KPNA2P52292 529 aaKnown RBP10.68□□□□□ -0.7
NEDD9-201ENST00000379433 BTKQ06187 659 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 SULT2A1Q06520 285 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 RPS6KA2Q15349 733 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 FAM45BPQ6NSW5 357 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 MBOAT1Q6ZNC8 495 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 KIAA0408Q6ZU52 694 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 FBXO39Q8N4B4 442 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 FAM45AQ8TCE6 357 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 CMTM5Q96DZ9 223 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 TRIB3Q96RU7 358 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 MCMBPQ9BTE3 642 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 C8orf4Q9NR00 106 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 WBP1LQ9NX94 342 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 LHX3Q9UBR4 397 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 FBXO10Q9UK96 956 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 ASB1Q9Y576 335 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 TBX10O75333 385 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 POLE2P56282 527 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 SH3BP2P78314 561 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 RAD51Q06609 339 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 TAF1AQ15573 450 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-201ENST00000379433 UGT3A1Q6NUS8 523 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 DPY19L3Q6ZPD9 716 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 ZSWIM9Q86XI8 627 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 KDM1BQ8NB78 822 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 RAB3IL1Q8TBN0 382 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 MTFMTQ96DP5 389 aaKnown RBP10.68□□□□□ -0.7
NEDD9-201ENST00000379433 C3orf30Q96M34 536 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 PANX3Q96QZ0 392 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 SIRT5Q9NXA8 310 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms