RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 UNC50Q53HI1 259 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 ZNF667Q5HYK9 610 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 ZYG11AQ6WRX3 759 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 NLRP8Q86W28 1048 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 CIR1Q86X95 450 aaPredicted RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 ELMOD1Q8N336 334 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 PPP1R14CQ8TAE6 165 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 ISG20Q96AZ6 181 aaKnown RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 ZNF670Q9BS34 389 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 ABCG8Q9H221 673 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 MARCH5Q9NX47 278 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 A0A0X1KG70 313 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 IQCF5A8MTL0 148 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 GP5P40197 560 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 MTPNP58546 118 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 UPP1Q16831 310 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 ATAT1Q5SQI0 421 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 HEATR6Q6AI08 1181 aaKnown RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 MTSS1LQ765P7 747 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 R3HCC1LQ7Z5L2 792 aaKnown RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 BMP8AQ7Z5Y6 402 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 GPR149Q86SP6 731 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 ADCY4Q8NFM4 1077 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 PTCD2Q8WV60 388 aaKnown RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 LRGUKQ96M69 825 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 FUNDC2Q9BWH2 189 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 FARSBQ9NSD9 589 aaKnown RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 PCDHB3Q9Y5E6 796 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 PCDHGA11Q9Y5H2 935 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 PLXNB3Q9ULL4 1909 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 JCHAINP01591 159 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 RPS3AP61247 264 aaKnown RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 TECRLQ5HYJ1 363 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 PTCRAQ6ISU1 281 aaPredicted RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 LIMS2Q7Z4I7 341 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 OR52B6Q8NGF0 335 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 ANKRD36BP1Q96IX9 119 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 GAD1Q99259 594 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 RTP3Q9BQQ7 232 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 DGCR6LQ9BY27 220 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 PNMA8BQ9ULN7 279 aaPredicted RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 HHLA1C9JL84 531 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 UBXN8O00124 270 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 ARPC2O15144 300 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 TNNC2P02585 160 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 PGAM1P18669 254 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 OR1G1P47890 313 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 MRPL58Q14197 206 aaKnown RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 TMEM132DQ14C87 1099 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 SF1Q15637 639 aaKnown RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 LIPMQ5VYY2 423 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 CLEC20AQ6ZU45 233 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 LRRTM3Q86VH5 581 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 DCP1BQ8IZD4 617 aaKnown RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 DTWD1Q8N5C7 304 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 TOP6BLQ8N6T0 577 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 GFM2Q969S9 779 aaKnown RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 ZNF518BQ9C0D4 1074 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 IFT80Q9P2H3 777 aaPredicted RBP7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 VPS28Q9UK41 221 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 FBXW11Q9UKB1 542 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 RAD54BQ9Y620 910 aa7.28□□□□□ -1.24
GPCPD1-201ENST00000379019 C1orf232A0A0U1RR37 186 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 SMIM28A0A1B0GU29 152 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 TMEM229AB2RXF0 380 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 J3KR12 359 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 GPC4O75487 556 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 OAZ2O95190 189 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 USP17L7P0C7H9 530 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 SCNN1GP51170 649 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 DGKEP52429 567 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 TRPC3Q13507 836 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 OXA1LQ15070 435 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 SKIV2LQ15477 1246 aaKnown RBP7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 MAPK11Q15759 364 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 UAP1L1Q3KQV9 507 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 ZMAT1Q5H9K5 638 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 SLC8B1Q6J4K2 584 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 ZBTB49Q6ZSB9 765 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 SPARTQ8N0X7 666 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 CELF2-AS1Q8N7Q2 184 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 TTC16Q8NEE8 873 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 EXT2Q93063 718 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 ZUFSPQ96AP4 578 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 TMEM125Q96AQ2 219 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 RHBDF1Q96CC6 855 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 NPY6RQ99463 290 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 SMOQ99835 787 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 OBP2AQ9NY56 170 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 TMEFF2Q9UIK5 374 aaPredicted RBP7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 PIP5K1BO14986 540 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 KLHL2O95198 593 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 PABPC1P11940 636 aaKnown RBP7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 PPP3CCP48454 512 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 CLCN4P51793 760 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 UBE2UQ5VVX9 321 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 TTC9BQ8N6N2 239 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 ADAMTS19Q8TE59 1207 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 CHPT1Q8WUD6 406 aa7.27□□□□□ -1.25
GPCPD1-201ENST00000379019 MRGPRX2Q96LB1 330 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms