RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 MYO1HQ8N1T3 1032 aa17.1■□□□□ 0.33
THUMPD2-201ENST00000378727 PPM1EQ8WY54 764 aa17.1■□□□□ 0.33
THUMPD2-201ENST00000378727 AP2M1Q96CW1 435 aa17.1■□□□□ 0.33
THUMPD2-201ENST00000378727 DTD2Q96FN9 168 aa17.1■□□□□ 0.33
THUMPD2-201ENST00000378727 PPP1R16AQ96I34 528 aa17.1■□□□□ 0.33
THUMPD2-201ENST00000378727 KCTD5Q9NXV2 234 aa17.1■□□□□ 0.33
THUMPD2-201ENST00000378727 CD274Q9NZQ7 290 aa17.1■□□□□ 0.33
THUMPD2-201ENST00000378727 TRAF6Q9Y4K3 522 aa17.1■□□□□ 0.33
THUMPD2-201ENST00000378727 CKAP5Q14008 2032 aa17.1■□□□□ 0.33
THUMPD2-201ENST00000378727 A0A1B0GTL3 188 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 SDHDO14521 159 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 MAGEC1O60732 1142 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 OR56A5P0C7T3 313 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 NCF2P19878 526 aaPredicted RBP17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 PSMD8P48556 350 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 ELP6Q0PNE2 266 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 PREPLQ4J6C6 727 aaPredicted RBP17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 METTL21CQ5VZV1 264 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 CLEC6AQ6EIG7 209 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 TXNDC11Q6PKC3 985 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 ERN2Q76MJ5 926 aaKnown RBP17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 DSG4Q86SJ6 1040 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 PELI3Q8N2H9 469 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 TRPC4APQ8TEL6 797 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 BTN2A2Q8WVV5 523 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 DLG3Q92796 817 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 ESAMQ96AP7 390 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 MAELQ96JY0 434 aaKnown RBP17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 ZMYND15Q9H091 742 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 NUDT4Q9NZJ9 180 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 KLHL42Q9P2K6 505 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 TMCO1Q9UM00 188 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 CDYLQ9Y232 598 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 ATG2BQ96BY7 2078 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 K7EQS6 105 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 HNRNPCL1O60812 293 aaKnown RBP17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 SKAP2O75563 359 aaPredicted RBP17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 KRT16P08779 473 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 ESRRAP11474 423 aaPredicted RBP17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 AOAHP28039 575 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 PTPN4P29074 926 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 CLCQ05315 142 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 TBCCQ15814 346 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 UGT3A2Q3SY77 523 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 ANKS6Q68DC2 871 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 CYP2U1Q7Z449 544 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 CHPFQ8IZ52 775 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 UTP4Q969X6 686 aaKnown RBP17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 DCUN1D1Q96GG9 259 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 FAR2Q96K12 515 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 ASB2Q96Q27 587 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 VPS35Q96QK1 796 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 CCDC28BQ9BUN5 200 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 ZBTB26Q9HCK0 441 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 PCTPQ9UKL6 214 aa17.09■□□□□ 0.33
THUMPD2-201ENST00000378727 TRPC5OSA6NMA1 111 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 C1QTNF3-AMACRE9PGA6 284 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 SNX2O60749 519 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 RASSF9O75901 435 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 SOD1P00441 154 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 P2RY2P41231 377 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 KIR2DL1P43626 348 aaPredicted RBP17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 RASSF2P50749 326 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 CNTN1Q12860 1018 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 GBX1Q14549 363 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 CRY1Q16526 586 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 PHKG1Q16816 387 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 AAK1Q2M2I8 961 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 TTLL9Q3SXZ7 439 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 ACAD11Q709F0 780 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 RAVER1Q8IY67 606 aaKnown RBP17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 ZNF483Q8TF39 744 aaPredicted RBP17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 GLYATL1Q969I3 302 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 NECTIN4Q96NY8 510 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 MIPEPQ99797 713 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 P2RY13Q9BPV8 354 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 HDAC8Q9BY41 377 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 MEAF6Q9HAF1 191 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 MID1IP1Q9NPA3 183 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 SEMA4BQ9NPR2 832 aaPredicted RBP17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 DYRK4Q9NR20 520 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 TAGLN3Q9UI15 199 aa17.08■□□□□ 0.33
THUMPD2-201ENST00000378727 DCXO43602 365 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 MMP20O60882 483 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 RECQL5O94762 991 aaPredicted RBP17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 FGF4P08620 206 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 CBSLP0DN79 551 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 C6P13671 934 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 CBSP35520 551 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 CPA2P48052 419 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 FOXA1P55317 472 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 CREB5Q02930 508 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 LCP2Q13094 533 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 C18orf21Q32NC0 220 aaPredicted RBP17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 TMEM52BQ4KMG9 183 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 FBXW10Q5XX13 1052 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 TMEM198Q66K66 360 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 RINLQ6ZS11 566 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 NUDT18Q6ZVK8 323 aa17.08■□□□□ 0.32
THUMPD2-201ENST00000378727 FRA10AC1Q70Z53 315 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms